 |
Job Description | P02916 | Confidence | 6.36% | Date | Thu Jan 5 10:57:33 GMT 2012 |
Rank | 56 | Aligned Residues | 18 |
% Identity | 11% | Template | d1ku7a_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| Sigma3 and sigma4 domains of RNA polymerase sigma factors
| Sigma4 domain
|
Resolution | 2.40 |
|
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | T | N | Q | L | T | F | E | R | A | Q | E | V | L | L | D | R | S |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |
Template Sequence |   |
D | G | R | E | H | T | L | E | E | V | G | A | Y | F | G | V | T | R |
Template Known Secondary structure |   |
T | S |
|
|
|
|  |  |  |  |  |  |  |  | T | S |
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
392 | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|