 |
Job Description | P75870 | Confidence | 3.66% | Date | Thu Jan 5 12:15:19 GMT 2012 |
Rank | 88 | Aligned Residues | 30 |
% Identity | 20% | Template | d2nefa_ |
SCOP info | Regulatory factor Nef
| Regulatory factor Nef
| Regulatory factor Nef
|
Resolution | UNK |
|
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | L | L | F | P | V | R | P | L | Q | D | N | L | A | R | C | Y | E | Q | L | A | R | Y | L | E | L | K | S | R | M |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|
|
|
|   |   |
|
|
|   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
F | P | V | T | P | Q | V | P | L | R | P | M | T | Y | K | A | A | V | D | L | S | H | F | L | K | E | K | G | G | L |
Template Known Secondary structure |   |
|
|
|
|
| S |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|