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| Job Description | P75870 | | Confidence | 6.74% | Date | Thu Jan 5 12:15:19 GMT 2012 |
| Rank | 36 | Aligned Residues | 71 |
| % Identity | 20% | Template | c3r84O_ |
| PDB info |
PDB header:transcription | Chain: O: PDB Molecule:mediator of rna polymerase ii transcription subunit 11; |
PDBTitle: structure of the mediator head subcomplex med11/22
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| Resolution | 2.05 Å |
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633 | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | |
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| Predicted Secondary structure | |
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| Query Sequence | |
P | E | I | L | A | F | L | D | D | A | V | C | Y | V | D | D | A | L | H | H | Q | P | A | D | E | E | R | V | N | E | A | L | A | S | L | K | Q | R | M | Q | Q | L | E | P | R | A | D | S | K | E | P | L | V | V | Q | Q | V | G | L | . |
L | I | A | L | L | P | E | I | G | R | L | Q | R | Q | I | T |
| Query Conservation | |
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| Alig confidence | |
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| Template Conservation | |
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| Template Sequence | |
Q | E | R | L | K | S | L | N | D | I | E | T | Q | L | C | S | X | L | Q | E | A | . |
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S | Q | V | T | F | I | F | G | E | L | K | R | G | N | E | S | V | K | P | Q | F | E | N | H | V | K | Q | F | Y | E | R | L | D | K | S | T | T | Q | L | R | K | E | I | Q | L | L | D | E | N | V | G |
| Template Known Secondary structure | |
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| G | G | G | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | T | T |
| Template Predicted Secondary structure | |
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7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
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. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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