Return to main results Retrieve Phyre Job Id

Job DescriptionP75870
Confidence3.74%DateThu Jan 5 12:15:19 GMT 2012
Rank86Aligned Residues165
% Identity13%Templatec3k07A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:cation efflux system protein cusa; PDBTitle: crystal structure of cusa
Resolution3.52 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410.........420.........430.........440.........450.........460.......
Predicted Secondary structure 










...
Query SS confidence 












































































. . .
Query Sequence  FRHAVRMSLVLCFGYAIIQITGMHHGYWILLTSLFVCQPNYNATRHRLKLRIIGTLVGIAIGIPVLWFVPSLEGQLV. . .
Query Conservation 

 


   
                 
  

   
  
  
 
      
  

  
                   ...
Alig confidence 

































































...







...
Template Conservation 
    
    

 


 
 

  
  

    

 
   

      
  

 


  
 
 


 ...






 
 
Template Sequence  LSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMHFQGLNANIMSLGGIAIAVGAM. . . VDAAIVMIENA
Template Known Secondary structure 

TT



...
Template Predicted Secondary structure 





...
Template SS confidence 















































































   338.340.........350.........360.........370.........380.........390.........400... ......410....
 
   468.470.........480.........490.........500....... ..510.........520........
Predicted Secondary structure  .................




..
Query SS confidence  . . . . . . . . . . . . . . . . .







































. .




















Query Sequence  . . . . . . . . . . . . . . . . . LLVITGVLFFAFRNVQYAHATMFITLLVLLCFNLLGEGFE. . VALPRVIDTLIGCAIAWAAVS
Query Conservation  .................                
       
               ..    
     

  

     
Alig confidence  .................







































..




















Template Conservation                   
     
   
   
   

 




  

 

          
          
  
 



Template Sequence  HKRLEEWQHQHPDATLDNKTRWQVITDASVEVGPALFISLLIITLSFIPIFTLEGQEGRLFGPLAFTKTYAMAGAALLAI
Template Known Secondary structure  S
SS


SGGGGG

Template Predicted Secondary structure 












Template SS confidence 















































































   415....420.........430.........440.........450.........460.........470.........480.........490....
 
   529530.... .....540.........550........
Predicted Secondary structure 


.....
Query SS confidence 





. . . . .























Query Sequence  YIWPDW. . . . . QFRNLPRMLERATEANCRYLDAIL
Query Conservation     
  .....    
   
   
           
Alig confidence 





.....























Template Conservation 
  


                             
Template Sequence  VVIPILMGYWPLNRFLIRVYHPLLLKVLHWPKTTL
Template Known Secondary structure  T


Template Predicted Secondary structure 






Template SS confidence 


































   495....500.........510.........520.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions