Job Description P75870 Confidence 3.78% Date Thu Jan 5 12:15:19 GMT 2012 Rank 85 Aligned Residues 90 % Identity 11% Template c3hd7A_ PDB info PDB header:exocytosis Chain: A: PDB Molecule:vesicle-associated membrane protein 2; PDBTitle: helical extension of the neuronal snare complex into the membrane,2 spacegroup c 1 2 1 Resolution 3.40 Å

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		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	P	A	D	L	L	K	T	L	G	F	L	L	N	N	L	R	A	I	D	A	Q	L	A	T	I	E	S	E	Q	A	Q	A	L	P	H	N	N	D	E	N	E	L	A	D	D	S	P	H	G	L	S	D	I	W	L	R	L	S	R	H	F	T	P	E	S	A	L	F	R	H	A	V	R	M	S	L	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	H	M	R	R	L	Q	Q	T	Q	A	Q	V	D	E	V	V	D	I	M	R	V	N	V	D	K	V	L	E	R	D	Q	K	L	S	E	L	D	D	R	A	D	A	L	Q	A	G	A	S	Q	F	E	T	S	A	A	K	L	K	R	K	Y	W	W	K	N	L	K	M	M	I	I	L	G	V	I	C	A	I
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		402	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	F	G	Y	A	I	I	Q	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	I	I	I	I	V	Y	F	S
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions