 |
Job Description | P75870 | Confidence | 5.35% | Date | Thu Jan 5 12:15:19 GMT 2012 |
Rank | 55 | Aligned Residues | 48 |
% Identity | 8% | Template | c2kb1A_ |
PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:wsk3; |
PDBTitle: nmr studies of a channel protein without membrane:2 structure and dynamics of water-solubilized kcsa
|
Resolution | UNK |
|
  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | K | L | T | I | P | L | T | L | G | M | V | A | A | A | L | T | D | . |
L | D | D | R | L | A | G | R | L | R | N | L | I | I | T | L | F | C | F | F | I | A | S | A | S | V | E | L | L | F |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |
| . |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |
|
|   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|
|
|   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |
|   |
Template Sequence |   |
P | D | A | I | W | W | S | V | E | T | A | T | T | V | G | Y | G | D | R | Y | P | V | T | E | E | G | R | K | V | A | E | Q | V | M | K | A | G | I | E | V | F | A | L | V | T | A | A | L | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | T |
|
| S |
|
| S | S |
|
|
| S | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|