|   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
| . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | R | I | P | V | V | W | I | H | G | L | E | C | T | C | C | T | E | S | F | I | R | S | A | H | P | L | A | K | D | V | I | L | S | L | . |
I | S | L | D | Y | D | D | T | L | M | A | A | A | G | T | Q | A | E | E | V | F | E | D | I | I | T | Q | Y | N | G | K | Y | I | L | A | V | E | G | N | P | P | L | G | E |
Query Conservation |   |
  |   |   |   |
|
|
|
|   |   |   |   |
|
|
|
|
|   |
|
|
|   |   |   |   |
|   |
|   |   |
|
|
|   |   | . |
|   |
|   |
|
|   |
|
|
|
|
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|
|   |
|   |   |
|   |   |   | . | . | . |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |
| . |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   | . |   |   |   |
|
|
|
|
|
|
|
|   |
|   |
|   |
Template Sequence |   |
K | E | V | R | C | K | I | V | T | I | S | D | T | R | T | E | E | T | . |
. |
. |
D | K | S | G | Q | L | L | H | E | L | L | K | E | A | G | H | K | V | T | S | Y | E | I | V | K | D | . |
D | K | E | S | I | Q | Q | A | V | L | A | G | Y | H | K | . |
E | D | V | D | V | V | L | T | N | G | G | T | G | I | T | K |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
| S | S |
|
| T | T | T | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |
| S | . | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
| . | T | T |
| S |  |  |  |  |  |
|
|
| S | S | S | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | |
|
|
. | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | G | M | F | C | I | S | S | G | R | P | F | I | E | K | L | K | R | A | A | A | G | A | S | A | I | I | A | W | G | T | C | A | S | W | G | C | V | Q | A | A | R | P | N | P | T | Q | . |
. |
. |
A | T | P | I | D | K | V | I | T | D | K | P | I | I | K | V | P | G | C | P | P | I | P | D | V | M | S | A | I | I |
Query Conservation |   |
  |
|   |
|   |   |   |
|
|   |   |   |   |
|   |
|   |   |
|   |   |
|
|
|   |
|
|
|   |
|
|
|
|   |   |
|
|
|   |
|
|   |
|
|
|
|   | . | . | . |
|   |
|
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |
|
|
Alig confidence |   |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | V | T | I | E | A | V | S | A | L | L | D | K | E | I | V | G | F | G | E | L | F | R | X | I | S | Y | L | E | D | I | G | S | S | A | X | L | S | R | A | I | G | G | T | I | G | R | K | V | V | F | S | X | P | G | S | S | G | A | V | R | L | A | X | N | K | L |
Template Known Secondary structure |   |
T | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  | T | T |
| S |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | G | G | G | G | G | G |
|
|
|  |  |  |  |  | T | T |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | |
|
|
|
|
|
|
|
|
|
|
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
  |
  |   |
206 | . | . | . | 210 |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
T | Y | M | V | T |
Query Conservation |   |
  |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
Template Sequence |   |
I | L | P | E | L |
Template Known Secondary structure |   |
 |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
155 | . | . | . | . |
  |