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Job DescriptionP69739
Confidence100.00%DateThu Jan 5 12:11:48 GMT 2012
Rank5Aligned Residues259
% Identity45%Templated1frfs_
SCOP infoHydA/Nqo6-like HydA/Nqo6-like Nickel-iron hydrogenase, small subunit
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.........70.........80.........90.........100.........110.........120........
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Query Sequence  KPRIPVVWIHGLECTCCTESFIRSAHPLAKDVILSLISLDYDDTLMAAAGTQAEEVFEDIITQYNGKYILAVEGNPPLGE
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Template Sequence  KHRPSVVWLHNAECTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGETSEAALHEALEGKDG. YYLVVEGGLPTID
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B

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TTTTT

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   4.....10.........20.........30.........40.........50.........60......... 70.........80..
 
   129130.........140.........150.........160.........170.........180.........190.........200........
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Query Sequence  QGMFCISSGRPFIEKLKRAAAGASAIIAWGTCASWGCVQAARPNPTQATPIDKVITDKPIIKVPGCPPIPDVMSAIITYM
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Template Sequence  GGQWGMVAGHPMIETCKKAAAKAKGIICIGTCSPYGGVQKAKPNPSQAKGVSEAL. GVKTINIPGCPPNPINFVGAVVHV
Template Known Secondary structure  TTSTT
STT

STTSTT
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   83......90.........100.........110.........120.........130....... ..140.........150.........160.
 
   209210.........220.........230.........240.........250.........260.........270.........280........
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Query Sequence  VTFDRLPDVDRMGRPLMFYGQRIHDKCYRRAHFDAGEFVQSWDDDAARKGYCLYKMGCKGPTTYNACSSTRWNDGVSFPI
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Template Sequence  LT. KGIPDLDENGRPKLFYGELVHDNCPRLPHFEASEFAPSFDSEEAKKGFCLYELGCKGPVTYNNCPKVLFN. QVNWPV
Template Known Secondary structure  T.T
S

B
TTS
BSSB
TTTT
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SSSTT
B
TTTT

GGG
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BT.TTB
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   162. ......170.........180.........190.........200.........210.........220.........230... ......
 
   289290.........300.........310.
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Query Sequence  QSGHGCLGCAENGFWDRGSFYSR
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Template Sequence  QAGHPCLGCSEPDFWDTMTPFYE
Template Known Secondary structure  GGT




TTSTTS
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   240.........250.........260..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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