Job Description P69739 Confidence 100.00% Date Thu Jan 5 12:11:48 GMT 2012 Rank 8 Aligned Residues 256 % Identity 36% Template d1cc1s_ SCOP info HydA/Nqo6-like HydA/Nqo6-like Nickel-iron hydrogenase, small subunit Resolution 2.15

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	I	P	V	V	W	I	H	G	L	E	C	T	C	C	T	E	S	F	I	R	S	A	H	P	L	A	K	D	V	I	L	S	L	I	S	L	D	Y	D	D	T	L	M	A	A	A	G	T	Q	A	E	E	V	F	E	D	I	I	T	Q	Y	N	G	K	Y	I	L	A	V	E	G	N	P	P	L	G	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	A	P	V	I	W	V	Q	G	Q	G	C	T	G	C	S	V	S	L	L	N	A	V	H	P	R	I	K	E	I	L	L	D	V	I	S	L	E	F	H	P	T	V	M	A	S	E	G	E	M	A	L	A	H	M	Y	E	I	A	E	K	F	N	G	N	F	F	L	L	V	E	G	A	I	P	T	A	K	E
Template Known Secondary structure											S	B			S								T		B	T	T	B								T							T	T	T		S																	T	T	T	S	S						S	B				G	G	G
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		130	.	.	.	.	.	.	.	.								.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.																																																.	.	.	.
Query SS confidence											.	.	.	.	.	.	.																																																.	.	.	.
Query Sequence		G	M	F	C	I	S	S	G	R	.	.	.	.	.	.	.	P	F	I	E	K	L	K	R	A	A	A	G	A	S	A	I	I	A	W	G	T	C	A	S	W	G	C	V	Q	A	A	R	P	N	P	T	Q	A	T	P	I	D	K	V	I	T	D	.	.	.	.	K	P	I	I	K	V	P	G	C	P	P	I	P
Query Conservation											.	.	.	.	.	.	.																																																.	.	.	.
Alig confidence											.	.	.	.	.	.	.																																																.	.	.	.
Template Conservation
Template Sequence		G	R	Y	C	I	V	G	E	A	K	A	H	H	H	E	V	T	M	M	E	L	I	R	D	L	A	P	K	S	L	A	T	V	A	V	G	T	C	S	A	Y	G	G	I	P	A	A	E	G	N	V	T	G	S	K	S	V	R	D	F	F	A	D	E	K	I	E	K	L	L	V	N	V	P	G	C	P	P	H	P
Template Known Secondary structure		G	T	T								S	S	S													G	G	G	S	S						S							T	G	G	G	S	T	T			S													T											S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		D	V	M	S	A	I	I	T	Y	M	V	T	.	.	.	.	.	.	F	D	R	L	P	D	V	D	R	M	G	R	P	L	M	F	Y	G	Q	R	I	H	D	K	C	Y	R	R	A	H	F	D	A	G	E	F	V	Q	S	W	D	D	D	A	A	R	K	G	Y	C	L	Y	K	M	G	C	K	G	P	T	T	Y
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																																													.	.	.	.	.
Template Conservation																																																																.	.	.	.	.
Template Sequence		D	W	M	V	G	T	L	V	A	A	W	S	H	V	L	N	P	T	E	H	P	L	P	E	L	D	D	D	G	R	P	L	L	F	F	G	D	N	I	H	E	N	C	P	Y	L	D	K	Y	D	N	S	E	F	A	E	T	F	T	K	P	G	.	.	.	.	.	C	K	A	E	L	G	C	K	G	P	S	T	Y
Template Known Secondary structure																	S	T	T	T	S					B		T	T	S		B					S	S	B	T	T	T	T		T	T						T	T		B		S	S	T	T	S	S	S	.	.	.	.	.	B	S	G	G	G	T			G	G	G		B
Template Predicted Secondary structure																																																																.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.	.	.	.	.	.	.	.	.	240	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	C	S	S	T	R	W	N	D	G	V	S	F	P	I	Q	S	G	H	G	C	L	G	C	A	E	N	G	F	W	D	R	G	S	F	Y	S	R
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		A	D	C	A	K	R	R	W	N	N	G	I	N	W	C	V	.	E	N	A	V	C	I	G	C	V	E	P	D	F	P	D	G	K	S	P	F	Y	V
Template Known Secondary structure			S						B	T	T	T	T	B				.			S					T	T	S	T	T	T	T	G	G	G		S	T	T	S
Template Predicted Secondary structure																		.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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