Job Description P69739 Confidence 100.00% Date Thu Jan 5 12:11:48 GMT 2012 Rank 2 Aligned Residues 267 % Identity 47% Template c3myrE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:hydrogenase (nife) small subunit hyda; PDBTitle: crystal structure of [nife] hydrogenase from allochromatium vinosum in2 its ni-a state Resolution 2.10 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	R	I	P	V	V	W	I	H	G	L	E	C	T	C	C	T	E	S	F	I	R	S	A	H	P	L	A	K	D	V	I	L	S	L	I	S	L	D	Y	D	D	T	L	M	A	A	A	G	T	Q	A	E	E	V	F	E	D	I	I	T	Q	Y	N	G	K	Y	I	L	A	V	E	G	N	P	P	L	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	R	P	S	V	I	W	L	S	F	Q	E	C	T	G	C	T	E	S	L	T	R	A	H	A	P	T	L	E	D	L	I	L	D	F	I	S	L	D	Y	H	H	T	L	Q	A	A	S	G	E	A	A	E	A	A	R	L	Q	A	M	D	E	N	R	G	Q	Y	L	V	I	V	D	G	S	I	P	G	P	D
Template Known Secondary structure				S									B			S											S	S									T							T	T	T		S	S																T	T	T	T							S	B				T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		129		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		Q	.	G	M	F	C	I	S	S	G	R	P	F	I	E	K	L	K	R	A	A	A	G	A	S	A	I	I	A	W	G	T	C	A	S	W	G	C	V	Q	A	A	R	P	N	P	T	Q	A	T	P	I	D	K	V	I	T	D	K	P	I	I	K	V	P	G	C	P	P	I	P	D	V	M	S	A	I	I	T	Y
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		A	N	P	G	F	S	T	V	A	G	H	S	N	Y	S	I	L	M	E	T	V	E	H	A	A	A	V	I	A	V	G	T	C	A	A	F	G	G	L	P	Q	A	R	P	N	P	T	G	A	M	S	V	M	D	L	V	R	D	K	P	V	I	N	V	P	G	C	P	P	I	P	M	V	I	T	G	V	I	A	H
Template Known Secondary structure		S		G	G	G	S			T	T												T	T		S													T	G	G	G	S	T	T		T	T											S	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	T	F	D	R	L	P	D	V	D	R	M	G	R	P	L	M	F	Y	G	Q	R	I	H	D	K	C	Y	R	R	A	H	F	D	A	G	E	F	V	Q	S	W	D	D	D	A	A	R	K	G	Y	C	L	Y	K	M	G	C	K	G	P	T	T	Y	N	A	C	S	S	T	R	W	N	D	G	V	S	F	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	V	F	G	R	L	P	E	L	D	G	Y	G	R	P	L	A	F	Y	G	Q	S	I	H	D	R	C	Y	R	R	P	F	Y	D	K	G	L	F	A	E	S	F	D	D	E	G	A	K	Q	G	W	C	L	Y	R	L	G	C	K	G	P	T	T	Y	N	A	C	A	T	M	K	W	N	D	G	T	S	W	P
Template Known Secondary structure						S	S				B		T	T	S		B					S	S	B	G	G	G	T		T	T						T	T		B		S	S	S	S	S					T	T		B		G	G	G	T			G	G	G		B		S	T	T	T	T		B	T	T	T	T	B		T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	S	G	H	G	C	L	G	C	A	E	N	G	F	W	D	R	G	S	F	Y	S	R	V	V	D	I	P
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		V	E	A	G	H	P	C	L	G	C	S	E	P	Q	F	W	D	A	G	.	G	F	Y	E	P	V	S	V	P
Template Known Secondary structure		T	T	T	T						T	T	S	T	T	G	G	G	S	S	.		T	T	S
Template Predicted Secondary structure																					.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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