 |
Job Description | P69739 | Confidence | 52.28% | Date | Thu Jan 5 12:11:48 GMT 2012 |
Rank | 35 | Aligned Residues | 26 |
% Identity | 31% | Template | c3e7nB_ |
PDB info |
PDB header:transport protein | Chain: B: PDB Molecule:d-ribose high-affinity transport system; |
PDBTitle: crystal structure of d-ribose high-affinity transport system from2 salmonella typhimurium lt2
|
Resolution | 2.45 Å |
|
  |   |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | K | L | K | R | A | A | A | G | A | S | A | I | I | A | W | G | T | C | A | S | W | G | C | V |
Query Conservation |   |
  |
|   |
|   |   |
|   |   |
|
|
|   |
|
|
|   |
|
|
|
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|   |   |
|   |   |
|
|   |
|
|
|   |   |   |
|
|
|
|
Template Sequence |   |
H | E | Q | F | K | K | L | T | A | D | S | Q | A | V | I | R | S | G | E | C | S | P | Y | A | N | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |
|
|
|
| S | T | T |
|
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|