Job Description P69739 Confidence 100.00% Date Thu Jan 5 12:11:48 GMT 2012 Rank 9 Aligned Residues 256 % Identity 34% Template c2wpnA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic [nifese] hydrogenase, small subunit; PDBTitle: structure of the oxidised, as-isolated nifese hydrogenase2 from d. vulgaris hildenborough Resolution 2.04 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	P	V	V	W	I	H	G	L	E	C	T	C	C	T	E	S	F	I	R	S	A	H	P	L	A	K	D	V	I	L	S	L	I	S	L	D	Y	D	D	T	L	M	A	A	A	G	T	Q	A	E	E	V	F	E	D	I	I	T	Q	Y	N	G	K	Y	I	L	A	V	E	G	N	P	P	L	G	E	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	P	V	F	W	L	Q	G	Q	G	C	T	G	C	S	V	T	L	L	N	S	V	H	P	S	I	A	D	V	L	L	K	V	I	S	L	E	F	H	P	T	V	M	A	W	E	G	E	H	A	I	E	H	M	R	K	V	A	E	K	F	K	G	K	F	F	L	V	I	E	G	S	V	P	V	E	A	D	G
Template Known Secondary structure										S	B			S								T				T	T								T							T	T	T		S																	T	T	T	T							S	B				T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		131	.	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure										.	.	.	.	.																																															.	.	.	.
Query SS confidence										.	.	.	.	.																																															.	.	.	.
Query Sequence		M	F	C	I	S	S	G	R	.	.	.	.	.	P	F	I	E	K	L	K	R	A	A	A	G	A	S	A	I	I	A	W	G	T	C	A	S	W	G	C	V	Q	A	A	R	P	N	P	T	Q	A	T	P	I	D	K	V	I	T	.	.	.	.	D	K	P	I	I	K	V	P	G	C	P	P	I	P	D	V	M
Query Conservation										.	.	.	.	.																																															.	.	.	.
Alig confidence										.	.	.	.	.																																															.	.	.	.
Template Conservation
Template Sequence		K	Y	C	I	I	G	E	A	N	H	H	E	I	S	M	V	D	A	L	K	E	F	G	P	N	A	A	A	V	L	A	V	G	T	C	A	A	Y	G	G	I	P	A	A	E	G	S	E	T	G	A	T	A	V	S	K	F	L	G	D	N	G	I	K	T	P	V	V	N	I	P	G	C	P	P	H	P	D	W	I
Template Known Secondary structure		T	T							T	T													G	G	G															T	G	G	G	S	T	T			S												T	T										S	S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.												.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	I	I	T	Y	M	V	T	F	D	R	.	.	.	.	.	.	.	.	.	.	.	L	P	D	V	D	R	M	G	R	P	L	M	F	Y	G	Q	R	I	H	D	K	C	Y	R	R	A	H	F	D	A	G	E	F	V	Q	S	W	D	D	D	A	A	R	K	G	Y	C	L	Y	K	M	G	C	K	G	P	T
Query Conservation														.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		V	G	T	V	V	L	A	L	D	A	I	K	K	N	G	L	E	G	G	L	A	E	V	V	K	V	L	D	S	D	G	R	P	T	P	F	F	G	R	N	I	H	E	N	C	P	Y	L	D	K	Y	D	E	G	V	M	S	A	T	F	T	D	K	V	.	.	.	.	G	C	R	Y	D	L	G	C	K	G	P	M
Template Known Secondary structure																										T	T	B		T	T	S		B					S	S	B	T	G	G	G		T	T							T		B		S	S	T	T			S	.	.	.	.	S	B	S	G	G	G	T			G	G	G
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230					.	.	.	.	.	.	.	.	.	240	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	N	A	C	S	S	T	R	W	N	D	G	V	S	F	P	I	Q	S	G	H	G	C	L	G	C	A	E	N	G	F	W	D	R	G	S	F	Y	S	R
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		T	M	A	D	C	F	E	R	K	W	N	G	G	V	N	W	C	V	.	Q	N	A	V	C	I	G	C	V	E	P	D	F	P	D	G	K	S	P	F	Y	Q
Template Known Secondary structure			B		S						B	T	T	T	T	B				.			S					T	T	S	T	T	T	T	G	G	G		S	T	T
Template Predicted Secondary structure																				.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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