Job Description P0AAM1 Confidence 16.04% Date Thu Jan 5 11:13:16 GMT 2012 Rank 12 Aligned Residues 105 % Identity 14% Template d2axta1 SCOP info Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Resolution 3.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	H	N	P	I	A	Q	A	A	M	F	G	Y	F	L	M	S	V	F	M	I	I	T	G	F	A	L	Y	S	E	H	S	Q	Y	A	I	F	A	P	F	R	Y	V	V	E	F	F	Y	W	T	G	G	N	S	M	D	I	H	S	W	H	R	L	G	M	W	L	I	G	A	F	V	I	G	H	V	Y	M	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	W	I	C	V	A	Y	S	A	P	L	A	S	A	F	A	V	F	L	I	Y	P	I	G	Q	G	S	F	S	D	G	M	P	L	G	I	S	G	T	F	N	F	M	I	V	F	Q	A	E	H	N	I	L	M	H	P	F	H	Q	L	G	V	A	G	V	F	G	G	A	L	F	C	A	M	H	G	S	L	V
Template Known Secondary structure			S						T												T							T		T	T	S	S			B	S																	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	E	D	I	M	S	D	D	T	V	I	S	T	M	V	N	G	Y	R	S	H	K	F	G	K
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		T	S	S	L	I	R	E	.	T	T	E	T	E	S	A	N	Y	G	Y	K	F	G	Q	E	E	E
Template Known Secondary structure				T	B				.	S		S	S	S		S	G	G	G			T	T		S	S
Template Predicted Secondary structure									.
Template SS confidence
		220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions