Job Description P0AAM1 Confidence 84.73% Date Thu Jan 5 11:13:16 GMT 2012 Rank 10 Aligned Residues 147 % Identity 7% Template d1y5ic1 SCOP info Heme-binding four-helical bundle Respiratory nitrate reductase 1 gamma chain Respiratory nitrate reductase 1 gamma chain Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	Q	K	S	D	N	V	V	S	H	Y	V	F	E	A	P	V	R	I	W	H	W	L	T	V	L	C	M	A	V	L	M	V	T	G	Y	F	I	G	K	P	L	P	S	V	S	G	E	A	T	Y	L	F	Y	M	G	Y	I	R	L	I	H	F	S	A	G	M	V	F	T	V	V	L	L	M	R	I	Y	W
Query Conservation
Alig confidence																																				.					.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.					.	.	.	.	.	.	.	.	.	.
Template Sequence		W	R	A	A	S	S	Q	M	L	D	R	K	G	M	N	L	A	S	N	L	F	H	I	G	I	L	G	I	F	V	G	H	F	F	.	G	M	L	T	.	.	.	.	.	.	.	.	.	.	L	P	I	E	V	A	Q	K	M	A	M	F	A	G	G	A	S	G	V	L	C	L	I	G	G	V	L	L	L	K	R
Template Known Secondary structure			S					T	T	T			T	T																						.					.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.											.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		A	F	V	G	N	R	Y	S	R	E	L	F	I	V	P	V	W	R	K	S	W	W	Q	G	V	W	Y	E	I	R	W	Y	L	F	L	A	K	R	P	S	A	D	I	G	H	N	P	I	A	Q	A	A	M	F	G	Y	F	L	M	S	V	F	M	I	I	T	G	F	A	L	Y	S	E	H	S	Q	Y	A	.	.
Query Conservation																																																																																.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	F	S	P	R	V	R	A	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D	I	L	I	L	S	L	L	V	I	Q	C	A	L	G	L	L	T	I	P	F	S	A	Q	H	M	D	G
Template Known Secondary structure					S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									G	G	G	T	T	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.																																							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
										159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	I	F	A	P	F	R	Y	V	V	E	F	F	Y	W	T	G	G	N	S	M	D	I	H	S	W	H	R	L	G	M	W	L	I	G	A	F	V	I
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	M	M	K	L	V	G	W	A	Q	S	V	V	T	F	H	G	G	A	S	Q	H	L	D	G	V	A	F	I	F	R	L	H	L	V	L	G	M	T	L	F	L	L	F	P
Template Known Secondary structure																T	T		T	T	G	G	G	G	G	T	T																			G	G
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions