Job Description P0AAM1 Confidence 98.04% Date Thu Jan 5 11:13:16 GMT 2012 Rank 7 Aligned Residues 147 % Identity 18% Template d1q90b_ SCOP info Heme-binding four-helical bundle Transmembrane di-heme cytochromes Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Resolution 3.10

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.									.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.
Query Sequence		L	T	V	L	C	M	A	V	L	M	V	T	G	Y	F	I	G	K	P	L	P	S	V	S	G	E	A	T	Y	L	F	Y	M	.	.	.	.	.	.	.	.	G	Y	I	R	L	I	H	F	S	A	G	M	V	F	T	V	V	L	L	M	R	I	Y	W	A	F	V	G	N	R	Y	S	R	E	L	F	I	V	P
Query Conservation																																			.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		I	T	F	T	C	F	L	V	Q	V	A	T	G	F	A	M	T	F	Y	Y	R	P	T	V	A	E	A	F	A	S	V	Q	Y	I	M	T	D	V	N	F	G	W	L	I	R	S	I	H	R	W	S	A	S	M	M	V	L	M	M	V	L	H	V	F	R	V	Y	L	T	G	G	F	K	R	P	R	E	.	.	.
Template Known Secondary structure																		T	T	T				S	T	T	T											T	S	T	T																												T	T	T	T	T	S	S	S			.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		V	W	R	K	S	W	W	Q	G	V	W	Y	E	I	R	W	Y	L	F	L	A	K	R	P	S	A	D	I	G	H	N	P	I	A	Q	A	A	M	F	G	Y	F	L	M	S	V	F	M	I	I	T	G	F	A	L	Y	S	E	H	S	Q	Y	A	I	F	A	P	F	R	Y	V	V	E	F	F	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	W	V	T	G	V	I	M	A	V	C	T	V	S	F	G	V	T	G	Y	S	L	P	W	D	Q	V	G	Y	W	A	V	K	I	V	T	G	V	P	D	A	I	P	G	V	G	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							T	T															G	G	G	G	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
												171	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.															.
Query SS confidence		.	.	.	.	.	.	.	.	.	.															.
Query Sequence		.	.	.	.	.	.	.	.	.	.	Y	W	T	G	G	N	S	M	D	I	H	S	W	H	.	R	L	G	M	W	L	I	G	A	F	V	I	G	H	V	Y	M	A	L	R	E
Query Conservation		.	.	.	.	.	.	.	.	.	.															.
Alig confidence		.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		F	I	V	E	L	L	R	G	G	V	G	V	G	Q	A	T	L	T	R	F	Y	S	L	H	T	F	V	L	P	L	L	T	A	V	F	M	L	M	H	F	L	M	I	R	K	Q
Template Known Secondary structure									T	S	S	S	S	S													T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions