Job Description P0AAM1 Confidence 53.05% Date Thu Jan 5 11:13:16 GMT 2012 Rank 11 Aligned Residues 111 % Identity 14% Template c3eh4A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c oxidase subunit 1; PDBTitle: structure of the reduced form of cytochrome ba3 oxidase from thermus2 thermophilus Resolution 2.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.										.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.
Query Sequence		D	N	V	V	S	H	Y	V	F	E	A	P	V	R	I	W	H	W	L	T	V	L	C	M	A	V	L	M	V	T	G	Y	F	I	G	K	P	L	P	S	V	S	G	E	A	T	Y	L	F	.	.	.	.	.	.	.	.	.	Y	M	G	Y	I	R	L	I	H	F	S	A	G	M	V	F	T	V	V	L	L	M
Query Conservation																																																			.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	I	S	R	V	Y	E	A	Y	P	E	K	K	A	T	L	Y	F	L	V	L	G	F	L	A	L	I	V	G	S	L	F	G	P	F	Q	A	L	N	Y	G	N	V	D	A	Y	P	L	L	K	R	L	L	P	F	V	Q	S	Y	Y	Q	G	L	T	L	H	G	V	L	N	A	I	V	F	T	Q	L	F	A
Template Known Secondary structure					S	T																																					T	T											S	T	T																	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	Y	W	A	F	V	G	N	R	Y	S	R	E	L	F	I	V	P	V	W	R	K	S	W	W	Q	G	V	W	Y	E	I	R	W	Y	L	F	L	A	K	R	P	S	A	D	I	G	H	N	P	I	A	Q	A	A	M	F	G	Y	F	L	M	S	V	F	M	I	I	T	G	F
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	I	M	V	Y	L	P	A	R	E	L	N	M	R	P	N	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	W	L	S	W	W	M	A	F	I	G	L	V	V	A	A	L	P	L	L
Template Known Secondary structure														T					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																																	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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