Job Description P0AA57 Confidence 96.27% Date Thu Jan 5 11:12:00 GMT 2012 Rank 4 Aligned Residues 83 % Identity 12% Template c2xwxB_ PDB info PDB header:chitin-binding protein Chain: B: PDB Molecule:glcnac-binding protein a; PDBTitle: vibrio cholerae colonization factor gbpa crystal structure Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		Q	V	T	A	A	P	Q	A	I	T	L	N	F	S	E	G	V	E	T	G	F	S	G	A	K	I	T	G	P	K	N	E	N	I	K	T	L	P	A	K	R	N	E	Q	D	Q	K	Q	L	I	V	P	L	A	D	S	L	K	P	G	T	Y	T	V	D	W	H	V	V	S	V	D	G	H	K	T	.	K	G	H
Query Conservation																																																																														.
Alig confidence																						.																																			.																					.
Template Conservation																						.																																			.
Template Sequence		E	I	G	E	Q	P	I	Q	L	D	L	T	L	E	A	Q	G	E	M	S	.	A	E	L	T	V	Y	N	H	H	Q	K	P	L	A	S	W	S	Q	A	M	T	D	G	E	L	K	S	I	T	L	E	L	S	E	.	A	K	A	G	H	H	M	L	V	S	R	I	K	D	R	D	G	N	L	Q	D	Q	Q	T
Template Known Secondary structure					S	S												S	S			.								T	T													T	T										S		.			S												T	T	S
Template Predicted Secondary structure																						.																																			.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		119	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	F	S	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	F	M	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions