Job Description P77202 Confidence 94.88% Date Thu Jan 5 12:26:16 GMT 2012 Rank 220 Aligned Residues 107 % Identity 17% Template c3l78A_ PDB info PDB header:transcription Chain: A: PDB Molecule:regulatory protein spx; PDBTitle: the crystal structure of smu.1142c from streptococcus mutans ua159 Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		V	Y	V	F	A	D	P	F	C	P	Y	C	K	Q	F	W	Q	Q	A	R	P	W	V	D	S	G	K	V	Q	L	R	T	L	L	V	G	V	I	K	P	E	S	P	A	T	A	A	A	I	L	A	S	K	.	D	P	A	K	T	W	Q	Q	Y	E	A	S	G	G	K	L	K	L	N	V	P	A	N	V	S	T
Query Conservation																																																							.
Alig confidence																	.	.	.	.																																			.
Template Conservation																	.	.	.	.
Template Sequence		V	T	L	F	L	S	P	S	C	T	S	C	R	K	A	.	.	.	.	R	A	W	L	N	R	H	D	V	V	F	Q	E	H	N	I	M	T	S	P	L	S	R	D	E	L	L	K	I	L	S	Y	T	E	N	G	T	E	D	I	I	S	T	R	S	K	V	F	Q	K	L	D	I	D	V	D	E	L	S	V	S
Template Known Secondary structure								S	S								.	.	.	.							T	T								T	T	T	S															S	S	T					B		T	T							T	T			G	G	G
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	M	K	V	L	S	D	N	E	K	L	M	D	D	L	G	A	N	V	T	P	A	I	Y	Y	M	S	K	E	N	T	L	Q	Q	A	V	G	L	P	D	Q	K
Query Conservation
Alig confidence											.	.	.	.	.	.								.	.							.	.	.
Template Conservation											.	.	.	.	.	.								.	.							.	.	.
Template Sequence		E	L	I	N	L	I	S	K	N	.	.	.	.	.	.	P	S	L	L	R	R	P	.	.	I	I	M	D	N	K	.	.	.	R	M	Q	I	G	F	N	E	D	E
Template Known Secondary structure											.	.	.	.	.	.	G	G	G	B		S		.	.					S	S	.	.	.					S			T	T	G
Template Predicted Secondary structure											.	.	.	.	.	.								.	.							.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.							.	.	.	90	.	.	.			.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions