Job Description P77202 Confidence 99.78% Date Thu Jan 5 12:26:16 GMT 2012 Rank 16 Aligned Residues 131 % Identity 11% Template c3hd5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsba; PDBTitle: crystal structure of a thiol:disulfide interchange protein2 dsba from bordetella parapertussis Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	K	D	A	P	V	I	V	Y	V	F	A	D	P	F	C	P	Y	C	K	Q	F	W	Q	Q	A	R	P	W	V	D	S	.	.	G	K	V	Q	L	R	T	L	L	V	G	V	I	K	P	E	S	P	A	T	A	A	A	I	L	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																			.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.													.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.
Template Sequence		S	D	T	P	G	K	I	E	V	L	E	F	F	A	Y	T	C	P	H	C	A	A	I	E	P	X	V	E	D	W	A	K	T	A	P	Q	D	V	V	L	K	Q	V	P	I	A	F	.	N	A	G	X	K	P	L	Q	Q	L	Y	Y	T	L	Q	A	L	E	R	P	D	L	H	P	K	V	F	T	A	I	H	T
Template Known Secondary structure			S	S	T	T										T	T																	T			T	T										S	.	S	G	G	G													T	T		T	T											T
Template Predicted Secondary structure																																																	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
							170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	K	D	P	A	K	T	W	Q	Q	Y	E	A	S	G	G	K	L	K	L	N	V	P	A	N	V	S	T	E	Q	M	K	V	L	S	D	N	E	K	L	M	D	D	L	G	A	N	V	T	P	A	I	Y	Y	M	S	K	E	N	T	L	Q	Q	A	V	G	L	P	D	Q	K	T	L	N	I	I
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																																			.							.	.	.
Template Conservation																																																									.							.	.	.
Template Sequence		E	R	K	R	L	F	D	K	K	A	X	G	E	W	A	A	S	Q	G	V	D	R	A	K	F	D	S	V	F	D	S	F	S	V	Q	T	Q	V	Q	R	A	S	Q	L	A	E	A	A	H	I	D	G	T	P	A	.	F	A	V	G	G	R	.	.	.	Y	X	T	S	P	V	L	A	G	N	D	Y	A	G	A
Template Known Secondary structure		S						S											T	T											T																		T	T			S	S	S		.				T	T	T	.	.	.					T	T	T	T	T	G	G	G	T	T
Template Predicted Secondary structure																																																									.							.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		245
Predicted Secondary structure
Query SS confidence
Query Sequence		M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		197

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions