Return to main results Retrieve Phyre Job Id

Job DescriptionP77202
Confidence99.80%DateThu Jan 5 12:26:16 GMT 2012
Rank14Aligned Residues137
% Identity12%Templatec3h93A_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:thiol:disulfide interchange protein dsba; PDBTitle: crystal structure of pseudomonas aeruginosa dsba
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120.........130.........140.. .......150.........160.........
Predicted Secondary structure 










..








................
Query SS confidence 


































. .


























. . . . . . . . . . . . . . . .
Query Sequence  LDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS. . GKVQLRTLLVGVIKPESPATAAAILAS. . . . . . . . . . . . . . . .
Query Conservation    
   
   
 




 



      
      ..
 
 
     
     
   
  
 

................
Alig confidence 


































..


























................
Template Conservation         

 



 
  

 
      
          
                
                  
    
Template Sequence  VPVSQPGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPALFGGIWNVHGQXFLTLESXGVEHDVHNAVFEAI
Template Known Secondary structure 


SSTTS
TT
T

TT


STT

Template Predicted Secondary structure 























Template SS confidence 















































































   1920.........30.........40.........50.........60.........70.........80.........90........
 
   170.........180.........190.........200.........210.........220.........230.........240..
Predicted Secondary structure  .......































Query SS confidence  . . . . . . .








































































Query Sequence  . . . . . . . KDPAKTWQQYEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLN
Query Conservation  ....... 
   
                          
     
   


 





  

 
      
      
 
Alig confidence  .......

















































.





.














Template Conservation              
   
   
 
                
      
   

 



.





.  
        
   
Template Sequence  HKEHKKLATPEEXADFLAGKGVDKEKFLSTYNSFAIKGQXEKAKKLAXAYQVTGVPT. XVVNGK. YRFDIGSAGGPEETL
Template Known Secondary structure  TS




STTT

T
T

SSS.TTT.TS
Template Predicted Secondary structure 



















.

.






Template SS confidence 















































































   99100.........110.........120.........130.........140.........150..... ....160. ........170......
 
   243...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  IIMG
Query Conservation   


Alig confidence 



Template Conservation    
 
Template Sequence  KLAD
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   177..180
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions