Return to main results Retrieve Phyre Job Id

Job DescriptionP77202
Confidence96.41%DateThu Jan 5 12:26:16 GMT 2012
Rank189Aligned Residues139
% Identity3%Templatec2he3A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glutathione peroxidase 2; PDBTitle: crystal structure of the selenocysteine to cysteine mutant of human2 glutathionine peroxidase 2 (gpx2)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   103......110.........120.........130.........140.. .......150.. .......160......
Predicted Secondary structure 













..


......



........
Query SS confidence 







































. .









. . . . . .













. . . . . . . .
Query Sequence  QSHWLLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS. . GKVQLRTLLV. . . . . . GVIKPESPATAAAI. . . . . . . .
Query Conservation      
  
   
   
 




 



      
      ..
 
 
     ......
     
   
  
........
Alig confidence 







































..









......













........
Template Conservation   
  


 
 






 
  
 

 
      
  
                                           
Template Sequence  DGEKVDFNTFRGRAVLIENVASLCGTTTRDFTQLNELQCRFPRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQ
Template Known Secondary structure  TS
GGGGTTS
TTSTTSTTTB

STT


S
GGGTSS
TT

Template Predicted Secondary structure 
































Template SS confidence 















































































   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   167..170.........180.........190.........200.........210.........220....... ..230.....
Predicted Secondary structure  ..........



























.



Query SS confidence  . . . . . . . . . .




























































.







Query Sequence  . . . . . . . . . . LASKDPAKTWQQYEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKEN. TLQQAVGL
Query Conservation  .......... 

 
   
                          
     
   


 





  

 
.      
 
Alig confidence  ..........






























....

























.







Template Conservation                                           ....            
      



  
 
       
Template Sequence  PTFTLVQKCEVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDP. . . . KLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRT
Template Known Secondary structure 
SSB

BBSSSTTB
S
S
TT
SS


SSG....GG


SS

TT


STT

TTS

TT
Template Predicted Secondary structure 















....




















Template SS confidence 















































































   97..100.........110.........120.........130....... ..140.........150.........160.........170..
 
   236...240.....
Predicted Secondary structure 

Query SS confidence 









Query Sequence  PDQKTLNIIM
Query Conservation       
  

Alig confidence 









Template Conservation       
   
Template Sequence  FPTINIEPDI
Template Known Secondary structure  S
GGGG
Template Predicted Secondary structure 

Template SS confidence 









   173......180..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions