Return to main results Retrieve Phyre Job Id

Job DescriptionP45423
Confidence41.92%DateThu Jan 5 12:02:36 GMT 2012
Rank6Aligned Residues36
% Identity33%Templated1vz0a1
SCOP infoDNA/RNA-binding 3-helical bundle KorB DNA-binding domain-like KorB DNA-binding domain-like
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160.........170....
Predicted Secondary structure 










Query SS confidence 




































Query Sequence  PLPRSTYVRLLSVKNADARSFYEKETLRCGWSVRQLE
Query Conservation   




 
 


 

  

 

  


   

   
 
Alig confidence 


















.
















Template Conservation   
    
  
       
 .          



  
Template Sequence  EITAGHARALLMLEPEDRL. WGLKEILEKGLSVRQAE
Template Known Secondary structure  SS
TS
GGG.T



Template Predicted Secondary structure 





.



Template SS confidence 




































   172.......180.........190 .........200.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions