Job Description P45423 Confidence 21.37% Date Thu Jan 5 12:02:36 GMT 2012 Rank 23 Aligned Residues 51 % Identity 16% Template c3cueJ_ PDB info PDB header:protein transport Chain: J: PDB Molecule:transport protein particle 22 kda subunit; PDBTitle: crystal structure of a trapp subassembly activating the rab2 ypt1p Resolution 3.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	L	S	E	G	T	T	A	G	Y	Q	Q	I	H	D	G	I	I	H	L	V	D	S	A	R	T	E	T	V	R	S	V	N	A	L	M	T	A	T	Y	Q	E	I	G	R	R	I	V	E	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	T	E	K	I	N	T	E	L	F	T	L	T	Y	G	S	I	V	A	Q	L	C	Q	D	Y	E	R	D	F	N	K	V	N	D	H	L	Y	S	M	G	Y	N	I	G	C	R	L	I	E	D
Template Known Secondary structure		S	S	S																							T	T	T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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