Job Description P0AAH4 Confidence 96.64% Date Thu Jan 5 11:12:56 GMT 2012 Rank 229 Aligned Residues 136 % Identity 17% Template c3hr8A_ PDB info PDB header:recombination Chain: A: PDB Molecule:protein reca; PDBTitle: crystal structure of thermotoga maritima reca Resolution 1.95 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	E	G	E	I	R	G	L	V	G	E	S	G	S	G	K	S	L	I	A	K	A	I	C	G	V	N	K	D	N	W	R	V	T	A	D	R	M	R	F	D	D	I	D	L	L	R	L	S	A	R	E	R	R	K	L	V	G	H	N	V	S	M	I	F	Q	E	P	Q	S	C	L	D	P	S	E	R	V	G
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		Y	P	R	G	R	I	V	E	I	F	G	Q	E	S	S	G	K	T	T	L	A	L	H	A	I	A	E	A	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	G	V	A	A	F	I	D	A	E	H	A	L	D	P	V	Y	.	.	.
Template Known Secondary structure				T	T								S	T	T	S	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								S	S								.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.																														.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		R	Q	L	M	Q	N	I	P	A	W	T	Y	K	G	R	W	W	Q	R	F	G	W	R	K	R	R	A	I	E	L	L	H	R	V	G	I	K	D	H	K	D	A	M	R	S	F	P	Y	E	L	T	E	G	E	C	Q	K	V	M	I	A	I	A	L	A	N	Q	P	R	L	L	I	.	.	.	A	D	E	P	T
Query Conservation																																																																										.	.	.
Alig confidence		.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation		.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	A	K	N	L	G	V	D	L	K	S	L	L	I	S	Q	P	D	H	G	E	Q	A	L	E	I	V	D	E	L	V	R	S	G	V	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	V	V	D	S	V	A	A	L	V	P	R	A	E	I	E	G	A	M	G	D	M	Q
Template Known Secondary structure		.					T			G	G	G							S	S														T	S			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T								T	T				S	S
Template Predicted Secondary structure		.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	M	E	P	T	T	Q	A	Q	I	F	R	L	L	T	R	L	N	Q	N	S	N	T	T	I	L	L	I	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	L	Q	A	R	L	M	S	Q	A	L	R	K	I	A	G	S	V	N	K	S	K	A	V	V	I	F	T	N	Q
Template Known Secondary structure		S	S																			T	S	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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