229 c3hr8A_ Probab=96.64   E-value=0.012  Score=36.14  Aligned_columns=136  Identities=17%

Q ss_pred             ECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCHHHCCCCCCHH
Q ss_conf             78998899987999889999999962357777130018996000112223222222234420788436501127235747
Q batch____        30 LTEGEIRGLVGESGSGKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCLDPSERVG  109 (330)
Q Consensus        30 i~~Ge~~~IvG~sGsGKSTL~~~l~Gl~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~Qd~~~~l~p~~tv~  109 (330)
                      ++.|.++-|.|++|||||||+..++--...                             .+-..+|-|.-.++++.+   
T Consensus        55 lp~g~iteI~G~~gsGKTtl~l~~~~~~~~-----------------------------~g~~~~yid~E~~~~~~~---  102 (342)
T c3hr8A_          55 YPRGRIVEIFGQESSGKTTLALHAIAEAQK-----------------------------MGGVAAFIDAEHALDPVY---  102 (342)
T ss_dssp             EETTEEEEEEESTTSSHHHHHHHHHHHHHH-----------------------------TTCCEEEEESSCCCCHHH---
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHH-----------------------------CCCEEEEEECCCCCCHHH---
T ss_conf             016607999638887789999999999984-----------------------------698599996888779888---


Q ss_pred             HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCEEEEEHHHHHCCCCEEE---EECCC
Q ss_conf             787866743112233333246768899999986188622455124721026333123100022100243167---65255
Q batch____       110 RQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGECQKVMIAIALANQPRLLI---ADEPT  186 (330)
Q Consensus       110 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~vgl~~~~~~~~~~p~~LSGG~~QRv~iAral~~~P~ili---lDEPt  186 (330)
                       .-...+...................+.+++..-...                   .+.|=-.-+..|+.-+   +++-.
T Consensus       103 -~~~lg~d~~~il~~~~~~~e~~l~~~~~~i~~~~~~-------------------liviDSi~al~~~~~~~~~~~~~~  162 (342)
T c3hr8A_         103 -AKNLGVDLKSLLISQPDHGEQALEIVDELVRSGVVD-------------------LIVVDSVAALVPRAEIEGAMGDMQ  162 (342)
T ss_dssp             -HHHHTCCGGGCEEECCSSHHHHHHHHHHHHHTSCCS-------------------EEEEECTTTCCCHHHHTTCCCSSC
T ss_pred             -HHHHCCCHHHEEEEECCCHHHHHHHHHHHHHCCCCC-------------------EEEEECHHCCCCCHHCCCCCCHHH
T ss_conf             -986059934678970599899999999984105983-------------------899812000273100034432014


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf             4888778999999999999866988999849
Q batch____       187 NSMEPTTQAQIFRLLTRLNQNSNTTILLISH  217 (330)
Q Consensus       187 s~LD~~~~~~i~~ll~~l~~~~g~tvi~itH  217 (330)
                      .+.....-.+.++.|..+.++++.+||++.|
T Consensus       163 ~~~~ar~l~~~l~~L~~~a~~~~~~vi~inq  193 (342)
T c3hr8A_         163 VGLQARLMSQALRKIAGSVNKSKAVVIFTNQ  193 (342)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHTSSCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             6899999999999999998873973999850