Email l.a.kelley@imperial.ac.uk Description P0AFM9 Date Thu Jan 5 11:26:48 GMT 2012 Unique Job ID 42b08a00809a53b3

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d3bzka3 52.2 16 Fold:Tex N-terminal region-like Superfamily:Tex N-terminal region-like Family:Tex N-terminal region-like 2 c1aq5C_ 48.3 24 PDB header:coiled-coil Chain: C: PDB Molecule:cartilage matrix protein; PDBTitle: high-resolution solution nmr structure of the trimeric coiled-coil2 domain of chicken cartilage matrix protein, 20 structures 3 c2xdjF_ 40.9 31 PDB header:unknown function Chain: F: PDB Molecule:uncharacterized protein ybgf; PDBTitle: crystal structure of the n-terminal domain of e.coli ybgf 4 d1e52a_ 40.6 22 Fold:Long alpha-hairpin Superfamily:C-terminal UvrC-binding domain of UvrB Family:C-terminal UvrC-binding domain of UvrB 5 c2oceA_ 36.3 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pa5201; PDBTitle: crystal structure of tex family protein pa5201 from2 pseudomonas aeruginosa 6 c2pnvA_ 32.1 23 PDB header:membrane protein Chain: A: PDB Molecule:small conductance calcium-activated potassium PDBTitle: crystal structure of the leucine zipper domain of small-2 conductance ca2+-activated k+ (skca) channel from rattus3 norvegicus 7 d1nkzb_ 24.9 37 Fold:Light-harvesting complex subunits Superfamily:Light-harvesting complex subunits Family:Light-harvesting complex subunits 8 d1jb0i_ 24.4 18 Fold:Single transmembrane helix Superfamily:Subunit VIII of photosystem I reaction centre, PsaI Family:Subunit VIII of photosystem I reaction centre, PsaI 9 c2oqqB_ 23.1 24 PDB header:transcription Chain: B: PDB Molecule:transcription factor hy5; PDBTitle: crystal structure of hy5 leucine zipper homodimer from2 arabidopsis thaliana 10 c3okqA_ 23.0 19 PDB header:protein binding Chain: A: PDB Molecule:bud site selection protein 6; PDBTitle: crystal structure of a core domain of yeast actin nucleation cofactor2 bud6 11 d1wrda1 22.6 17 Fold:Spectrin repeat-like Superfamily:GAT-like domain Family:GAT domain 12 c1b9uA_ 20.8 32 PDB header:hydrolase Chain: A: PDB Molecule:protein (atp synthase); PDBTitle: membrane domain of the subunit b of the e.coli atp synthase 13 d1pfta_ 20.7 50 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Transcriptional factor domain 14 c3mk7F_ 20.2 21 PDB header:oxidoreductase Chain: F: PDB Molecule:cytochrome c oxidase, cbb3-type, subunit p; PDBTitle: the structure of cbb3 cytochrome oxidase 15 c3ixzB_ 20.2 28 PDB header:hydrolase Chain: B: PDB Molecule:potassium-transporting atpase subunit beta; PDBTitle: pig gastric h+/k+-atpase complexed with aluminium fluoride 16 d1dl6a_ 20.1 25 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Transcriptional factor domain 17 d1wr6a1 19.4 17 Fold:Spectrin repeat-like Superfamily:GAT-like domain Family:GAT domain 18 c3bz1y_ 18.8 47 PDB header:electron transport Chain: Y: PDB Molecule:photosystem ii protein y; PDBTitle: crystal structure of cyanobacterial photosystem ii (part 12 of 2). this file contains first monomer of psii dimer 19 c2d96A_ 18.6 32 PDB header:transcription Chain: A: PDB Molecule:nuclear factor nf-kappa-b p100 subunit; PDBTitle: solution structure of the death domain of nuclear factor nf-2 kappa-b p100 20 c3arcy_ 18.1 47 PDB header:electron transport, photosynthesis Chain: Y: PDB Molecule:protein ycf12; PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution 21 c3arcY_ not modelled 18.1 47 PDB header:electron transport, photosynthesis Chain: Y: PDB Molecule:protein ycf12; PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution 22 d1nu9c2 not modelled 17.8 40 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Staphylocoagulase Family:Staphylocoagulase 23 c1a92B_ not modelled 17.6 24 PDB header:leucine zipper Chain: B: PDB Molecule:delta antigen; PDBTitle: oligomerization domain of hepatitis delta antigen 24 c3a0hy_ not modelled 17.1 47 PDB header:electron transport Chain: Y: PDB Molecule:photosystem ii reaction center protein ycf12; PDBTitle: crystal structure of i-substituted photosystem ii complex 25 c3a0hY_ not modelled 17.1 47 PDB header:electron transport Chain: Y: PDB Molecule:photosystem ii reaction center protein ycf12; PDBTitle: crystal structure of i-substituted photosystem ii complex 26 c3m06F_ not modelled 16.9 14 PDB header:protein binding Chain: F: PDB Molecule:tnf receptor-associated factor 2; PDBTitle: crystal structure of traf2 27 c3ls1A_ not modelled 14.8 12 PDB header:photosynthesis Chain: A: PDB Molecule:sll1638 protein; PDBTitle: crystal structure of cyanobacterial psbq from synechocystis2 sp. pcc 6803 complexed with zn2+ 28 d1g7oa1 not modelled 14.5 14 Fold:GST C-terminal domain-like Superfamily:GST C-terminal domain-like Family:Glutathione S-transferase (GST), C-terminal domain 29 d1o3xa_ not modelled 14.3 24 Fold:Spectrin repeat-like Superfamily:GAT-like domain Family:GAT domain 30 d1bf5a1 not modelled 14.2 17 Fold:STAT-like Superfamily:STAT Family:STAT 31 c2jgoB_ not modelled 14.2 30 PDB header:de novo protein Chain: B: PDB Molecule:coil ser l9c; PDBTitle: stucture of the arsenated de novo designed peptide coil ser2 l9c 32 c3ljmC_ not modelled 14.2 30 PDB header:de novo protein Chain: C: PDB Molecule:coil ser l9c; PDBTitle: structure of de novo designed apo peptide coil ser l9c 33 c3ljmB_ not modelled 14.2 30 PDB header:de novo protein Chain: B: PDB Molecule:coil ser l9c; PDBTitle: structure of de novo designed apo peptide coil ser l9c 34 c2jgoC_ not modelled 14.2 30 PDB header:de novo protein Chain: C: PDB Molecule:coil ser l9c; PDBTitle: stucture of the arsenated de novo designed peptide coil ser2 l9c 35 c2jgoA_ not modelled 14.2 30 PDB header:de novo protein Chain: A: PDB Molecule:coil ser l9c; PDBTitle: stucture of the arsenated de novo designed peptide coil ser2 l9c 36 c3ljmA_ not modelled 14.2 30 PDB header:de novo protein Chain: A: PDB Molecule:coil ser l9c; PDBTitle: structure of de novo designed apo peptide coil ser l9c 37 c3efdK_ not modelled 14.1 27 PDB header:immune system Chain: K: PDB Molecule:kcsa; PDBTitle: the crystal structure of the cytoplasmic domain of kcsa 38 c3b37A_ not modelled 14.1 20 PDB header:hydrolase Chain: A: PDB Molecule:aminopeptidase n; PDBTitle: crystal structure of e. coli aminopeptidase n in complex with tyrosine 39 c3a0by_ not modelled 13.8 47 PDB header:electron transport Chain: Y: PDB Molecule:photosystem ii reaction center protein ycf12; PDBTitle: crystal structure of br-substituted photosystem ii complex 40 c2d99A_ not modelled 13.6 42 PDB header:transcription Chain: A: PDB Molecule:general transcription factor ii-i repeat domain- PDBTitle: solution structure of rsgi ruh-048, a gtf2i domain in human2 cdna 41 c2e3lA_ not modelled 13.5 25 PDB header:transcription Chain: A: PDB Molecule:transcription factor gtf2ird2 beta; PDBTitle: solution structure of rsgi ruh-068, a gtf2i domain in human2 cdna 42 c2dn5A_ not modelled 13.1 50 PDB header:transcription Chain: A: PDB Molecule:general transcription factor ii-i repeat domain- PDBTitle: solution structure of rsgi ruh-057, a gtf2i domain in human2 cdna 43 c2dbfA_ not modelled 12.9 33 PDB header:signaling protein Chain: A: PDB Molecule:nuclear factor nf-kappa-b p105 subunit; PDBTitle: solution structure of the death domain in human nuclear2 factor nf-kappa-b p105 subunit 44 c2dzrA_ not modelled 12.6 42 PDB header:transcription Chain: A: PDB Molecule:general transcription factor ii-i repeat domain- PDBTitle: solution structure of rsgi ruh-067, a gtf2i domain in human2 cdna 45 c2dzqA_ not modelled 12.5 42 PDB header:transcription Chain: A: PDB Molecule:general transcription factor ii-i repeat domain- PDBTitle: solution structure of rsgi ruh-066, a gtf2i domain in human2 cdna 46 c1cosA_ not modelled 12.2 30 PDB header:alpha-helical bundle Chain: A: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle 47 c1cosC_ not modelled 12.2 30 PDB header:alpha-helical bundle Chain: C: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle 48 c1cosB_ not modelled 12.2 30 PDB header:alpha-helical bundle Chain: B: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle 49 d1wmub_ not modelled 12.0 18 Fold:Globin-like Superfamily:Globin-like Family:Globins 50 c3a0bY_ not modelled 11.0 47 PDB header:electron transport Chain: Y: PDB Molecule:photosystem ii reaction center protein ycf12; PDBTitle: crystal structure of br-substituted photosystem ii complex 51 d1q60a_ not modelled 10.8 42 Fold:GTF2I-like repeat Superfamily:GTF2I-like repeat Family:GTF2I-like repeat 52 c2ed2A_ not modelled 10.8 33 PDB header:transcription Chain: A: PDB Molecule:general transcription factor ii-i; PDBTitle: solution structure of rsgi ruh-069, a gtf2i domain in human2 cdna 53 d1zkea1 not modelled 10.5 38 Fold:ROP-like Superfamily:HP1531-like Family:HP1531-like 54 d1f6ga_ not modelled 10.5 21 Fold:Voltage-gated potassium channels Superfamily:Voltage-gated potassium channels Family:Voltage-gated potassium channels 55 c2dn4A_ not modelled 10.4 50 PDB header:transcription Chain: A: PDB Molecule:general transcription factor ii-i; PDBTitle: solution structure of rsgi ruh-060, a gtf2i domain in human2 cdna 56 c1coiA_ not modelled 10.4 25 PDB header:alpha-helical bundle Chain: A: PDB Molecule:coil-vald; PDBTitle: designed trimeric coiled coil-vald 57 c3c18B_ not modelled 10.3 12 PDB header:transferase Chain: B: PDB Molecule:nucleotidyltransferase-like protein; PDBTitle: crystal structure of nucleotidyltransferase-like protein2 (zp_00538802.1) from exiguobacterium sibiricum 255-15 at 1.90 a3 resolution 58 c3b8eB_ not modelled 10.1 28 PDB header:hydrolase/transport protein Chain: B: PDB Molecule:sodium/potassium-transporting atpase subunit PDBTitle: crystal structure of the sodium-potassium pump 59 c1ci6B_ not modelled 10.1 19 PDB header:transcription Chain: B: PDB Molecule:transcription factor c/ebp beta; PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer 60 c1by0A_ not modelled 10.0 24 PDB header:rna binding protein Chain: A: PDB Molecule:protein (hepatitis delta antigen); PDBTitle: n-terminal leucine-repeat region of hepatitis delta antigen 61 d1ijdb_ not modelled 9.9 39 Fold:Light-harvesting complex subunits Superfamily:Light-harvesting complex subunits Family:Light-harvesting complex subunits 62 c2ejeA_ not modelled 9.3 33 PDB header:transcription Chain: A: PDB Molecule:general transcription factor ii-i; PDBTitle: solution structure of rsgi ruh-071, a gtf2i domain in human2 cdna 63 c3bmbB_ not modelled 8.8 19 PDB header:rna binding protein Chain: B: PDB Molecule:regulator of nucleoside diphosphate kinase; PDBTitle: crystal structure of a new rna polymerase interacting2 protein 64 c3eabD_ not modelled 8.7 15 PDB header:cell cycle Chain: D: PDB Molecule:spastin; PDBTitle: crystal structure of spastin mit in complex with escrt iii 65 d1wmga_ not modelled 8.2 47 Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD 66 d1mlda2 not modelled 8.1 18 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 67 c2d3kA_ not modelled 7.8 23 PDB header:hydrolase Chain: A: PDB Molecule:peptidyl-trna hydrolase; PDBTitle: structural study on project id ph1539 from pyrococcus2 horikoshii ot3 68 c3sb1B_ not modelled 7.6 24 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hydrogenase expression protein; PDBTitle: hydrogenase expression protein huph from thiobacillus denitrificans2 atcc 25259 69 c3r45C_ not modelled 7.6 30 PDB header:nuclear protein Chain: C: PDB Molecule:holliday junction recognition protein; PDBTitle: structure of a cenp-a-histone h4 heterodimer in complex with chaperone2 hjurp 70 c1xtyD_ not modelled 7.6 16 PDB header:hydrolase Chain: D: PDB Molecule:peptidyl-trna hydrolase; PDBTitle: crystal structure of sulfolobus solfataricus peptidyl-trna2 hydrolase 71 d2ay0a1 not modelled 7.5 33 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:PutA pre-N-terminal region-like 72 d1ab4a_ not modelled 7.3 24 Fold:Type II DNA topoisomerase Superfamily:Type II DNA topoisomerase Family:Type II DNA topoisomerase 73 c3m6nA_ not modelled 7.3 16 PDB header:lyase Chain: A: PDB Molecule:rpff protein; PDBTitle: crystal structure of rpff 74 d1kqfb2 not modelled 7.1 25 Fold:Single transmembrane helix Superfamily:Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor Family:Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor 75 c3ilwA_ not modelled 6.9 18 PDB header:isomerase Chain: A: PDB Molecule:dna gyrase subunit a; PDBTitle: structure of dna gyrase subunit a n-terminal domain 76 d1x79a_ not modelled 6.9 23 Fold:Spectrin repeat-like Superfamily:GAT-like domain Family:GAT domain 77 d1t3wa_ not modelled 6.5 30 Fold:DNA primase DnaG, C-terminal domain Superfamily:DNA primase DnaG, C-terminal domain Family:DNA primase DnaG, C-terminal domain 78 c2vmlD_ not modelled 6.4 29 PDB header:photosynthesis Chain: D: PDB Molecule:phycocyanin beta chain; PDBTitle: the monoclinic structure of phycocyanin from gloeobacter2 violaceus 79 c3pp5A_ not modelled 6.3 17 PDB header:structural protein Chain: A: PDB Molecule:brk1; PDBTitle: high-resolution structure of the trimeric scar/wave complex precursor2 brk1 80 d2clyc1 not modelled 6.2 13 Fold:Mitochondrial ATP synthase coupling factor 6 Superfamily:Mitochondrial ATP synthase coupling factor 6 Family:Mitochondrial ATP synthase coupling factor 6 81 c2o7hF_ not modelled 6.1 16 PDB header:transcription Chain: F: PDB Molecule:general control protein gcn4; PDBTitle: crystal structure of trimeric coiled coil gcn4 leucine zipper 82 c2ergA_ not modelled 6.0 19 PDB header:transcription activator/dna Chain: A: PDB Molecule:regulatory protein leu3; PDBTitle: crystal structure of leu3 dna-binding domain with a single2 h50c mutation complexed with a 15mer dna duplex 83 c3m0dC_ not modelled 5.8 13 PDB header:signaling protein Chain: C: PDB Molecule:tnf receptor-associated factor 1; PDBTitle: crystal structure of the traf1:traf2:ciap2 complex 84 c3hroA_ not modelled 5.8 26 PDB header:transport protein Chain: A: PDB Molecule:transient receptor potential (trp) channel PDBTitle: crystal structure of a c-terminal coiled coil domain of2 transient receptor potential (trp) channel subfamily p3 member 2 (trpp2, polycystic kidney disease 2) 85 d3ehbb2 not modelled 5.8 7 Fold:Transmembrane helix hairpin Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region Family:Cytochrome c oxidase subunit II-like, transmembrane region 86 c3hrxD_ not modelled 5.7 13 PDB header:lyase Chain: D: PDB Molecule:probable enoyl-coa hydratase; PDBTitle: crystal structure of phenylacetic acid degradation protein paag 87 c2ba2A_ not modelled 5.6 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical upf0134 protein mpn010; PDBTitle: crystal structure of the duf16 domain of mpn010 from2 mycoplasma pneumoniae 88 c2voyE_ not modelled 5.6 20 PDB header:hydrolase Chain: E: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: cryoem model of copa, the copper transporting atpase from2 archaeoglobus fulgidus 89 c2hbpA_ not modelled 5.6 14 PDB header:endocytosis, protein binding Chain: A: PDB Molecule:cytoskeleton assembly control protein sla1; PDBTitle: solution structure of sla1 homology domain 1 90 d2p90a1 not modelled 5.5 22 Fold:Phosphorylase/hydrolase-like Superfamily:Cgl1923-like Family:Cgl1923-like 91 c2inrA_ not modelled 5.5 27 PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase 4 subunit a; PDBTitle: crystal structure of a 59 kda fragment of topoisomerase iv subunit a2 (grla) from staphylococcus aureus 92 c3p8cE_ not modelled 5.5 30 PDB header:protein binding Chain: E: PDB Molecule:probable protein brick1; PDBTitle: structure and control of the actin regulatory wave complex 93 d1in4a1 not modelled 5.4 12 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Helicase DNA-binding domain 94 d2h8fb1 not modelled 5.4 13 Fold:Globin-like Superfamily:Globin-like Family:Globins 95 c2novD_ not modelled 5.0 25 PDB header:isomerase Chain: D: PDB Molecule:dna topoisomerase 4 subunit a; PDBTitle: breakage-reunion domain of s.pneumoniae topo iv: crystal2 structure of a gram-positive quinolone target