PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2vmlD_

Fold library id	PDB Header	Molecule	Title
c2vmlD_	PDB header: photosynthesis	Chain: D: PDB Molecule: phycocyanin beta chain;	PDBTitle: the monoclinic structure of phycocyanin from gloeobacter2 violaceus

Links to external resources
Added to library: Tue Mar 16 12:52:26 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M Q D A F T K A I V A A D L R G S F L S E Q E L N Q L T N L V K E S N K R L D A V N A I T G N A A E I I S D A A H K L F A E Q T D L I R P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T
G G G G S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G N A Y P N R R M A A C L R D M E I I L R Y V S Y A L L A G D A S V L E D R C L N G L K E T Y V A L G T P T R S V A R A V Q L M K E T A I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
S T S S T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . .

Sequence Y V N S P S G V T R G D C S A L V N E A A T Y F D K A A A S I A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	Q	D	A	F	T	K	A	I	V	A	A	D	L	R	G	S	F	L	S	E	Q	E	L	N	Q	L	T	N	L	V	K	E	S	N	K	R	L	D	A	V	N	A	I	T	G	N	A	A	E	I	I	S	D	A	A	H	K	L	F	A	E	Q	T	D	L	I	R	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T																	T													T	T																	G	G	G	G	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	N	A	Y	P	N	R	R	M	A	A	C	L	R	D	M	E	I	I	L	R	Y	V	S	Y	A	L	L	A	G	D	A	S	V	L	E	D	R	C	L	N	G	L	K	E	T	Y	V	A	L	G	T	P	T	R	S	V	A	R	A	V	Q	L	M	K	E	T	A	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T		S																									T	S	S							T	T	T	T									T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Sequence	Y	V	N	S	P	S	G	V	T	R	G	D	C	S	A	L	V	N	E	A	A	T	Y	F	D	K	A	A	A	S	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		S	S