Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFM9
Confidence5.75%DateThu Jan 5 11:26:48 GMT 2012
Rank85Aligned Residues46
% Identity7%Templated3ehbb2
SCOP infoTransmembrane helix hairpin Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
Resolution2.32

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.......
Predicted Secondary structure 






Query SS confidence 













































Query Sequence  SALFLAIPLTIFVLFVLPIWLWLHYSNRSGRSELSQSEQQRLAQLA
Query Conservation     

 

 


  



 





 

     

  
   

 
 
Alig confidence 













































Template Conservation     
 
   
 
 
   
       
            
  




Template Sequence  HFVLYIITAVTIFVCLLLLICIVRFNRRANPVPARFTHNTPIEVIW
Template Known Secondary structure  SSTTTSSS






Template Predicted Secondary structure 












Template SS confidence 













































   36...40.........50.........60.........70.........80.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions