Email l.a.kelley@imperial.ac.uk Description P0C037 Date Thu Jan 5 11:29:39 GMT 2012 Unique Job ID 42b06a49da75b9e6

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2oyza1 100.0 49 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:VPA0057-like 2 c3hqxA_ 100.0 34 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0345 protein aciad0356; PDBTitle: crystal structure of protein of unknown function (duf1255,pf06865)2 from acinetobacter sp. adp1 3 c3eo6B_ 100.0 26 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein of unknown function (duf1255); PDBTitle: crystal structure of protein of unknown function (duf1255)2 (afe_2634) from acidithiobacillus ferrooxidans ncib8455 at3 0.97 a resolution 4 d1yhfa1 97.2 17 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like 5 d2pyta1 96.9 16 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:EutQ-like 6 c3bcwB_ 96.9 21 PDB header:unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a duf861 family protein with a rmlc-like cupin2 fold (bb1179) from bordetella bronchiseptica rb50 at 1.60 a3 resolution 7 c2ozjB_ 96.8 16 PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel; PDBTitle: crystal structure of a cupin superfamily protein (dsy2733) from2 desulfitobacterium hafniense dcb-2 at 1.60 a resolution 8 c3rnsA_ 96.5 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: cupin 2 conserved barrel domain protein from leptotrichia buccalis 9 c3myxA_ 96.5 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pspto_0244; PDBTitle: crystal structure of a pspto_0244 (protein with unknown function which2 belongs to pfam duf861 family) from pseudomonas syringae pv. tomato3 str. dc3000 at 1.30 a resolution 10 d1o5ua_ 96.5 22 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Hypothetical protein TM1112 11 c2q30C_ 96.4 10 PDB header:unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a rmlc-like cupin protein (dde_2303) from2 desulfovibrio desulfuricans subsp. at 1.94 a resolution 12 c3es4B_ 96.4 17 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein duf861 with a rmlc-like cupin fold; PDBTitle: crystal structure of protein of unknown function (duf861) with a rmlc-2 like cupin fold (17741406) from agrobacterium tumefaciens str. c583 (dupont) at 1.64 a resolution 13 c3cewA_ 96.3 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized cupin protein; PDBTitle: crystal structure of a cupin protein (bf4112) from bacteroides2 fragilis. northeast structural genomics consortium target bfr205 14 c2pfwB_ 95.8 18 PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution 15 c3h8uA_ 95.8 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized conserved protein with double-stranded PDBTitle: crystal structure of uncharacterized conserved protein with double-2 stranded beta-helix domain (yp_001338853.1) from klebsiella3 pneumoniae subsp. pneumoniae mgh 78578 at 1.80 a resolution 16 c3lwcA_ 95.6 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of structural genomics, unknown function2 (yp_766765.1) from rhizobium leguminosarum bv. viciae 3841 at 1.40 a3 resolution 17 c3fjsC_ 95.6 15 PDB header:biosynthetic protein Chain: C: PDB Molecule:uncharacterized protein with rmlc-like cupin fold; PDBTitle: crystal structure of a putative biosynthetic protein with rmlc-like2 cupin fold (reut_b4087) from ralstonia eutropha jmp134 at 1.90 a3 resolution 18 d2f4pa1 95.6 16 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like 19 c3ht2A_ 95.2 14 PDB header:lyase Chain: A: PDB Molecule:remf protein; PDBTitle: zink containing polyketide cyclase remf from streptomyces2 resistomycificus 20 c3d82A_ 95.1 21 PDB header:metal binding protein Chain: A: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a cupin-2 domain containing protein (sfri_3543)2 from shewanella frigidimarina ncimb 400 at 2.05 a resolution 21 d1vj2a_ not modelled 95.1 18 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1459-like 22 c3jzvA_ not modelled 94.9 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein rru_a2000; PDBTitle: crystal structure of rru_a2000 from rhodospirillum rubrum: a cupin-22 domain. 23 d1juha_ not modelled 94.9 26 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Quercetin 2,3-dioxygenase-like 24 d1v70a_ not modelled 94.8 12 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like 25 c2i45C_ not modelled 94.8 15 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein nmb1881 from neisseria meningitidis 26 d2d40a1 not modelled 94.8 18 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Gentisate 1,2-dioxygenase-like 27 d1o4ta_ not modelled 94.7 14 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like 28 d1pmia_ not modelled 94.7 19 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Type I phosphomannose isomerase 29 c2fqpD_ not modelled 94.6 9 PDB header:metal binding protein Chain: D: PDB Molecule:hypothetical protein bp2299; PDBTitle: crystal structure of a cupin domain (bp2299) from bordetella pertussis2 tohama i at 1.80 a resolution 30 d1dgwa_ not modelled 94.2 16 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 31 c2opkC_ not modelled 94.1 23 PDB header:isomerase Chain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a putative mannose-6-phosphate isomerase2 (reut_a1446) from ralstonia eutropha jmp134 at 2.10 a resolution 32 c2vpvA_ not modelled 94.1 17 PDB header:cell cycle Chain: A: PDB Molecule:protein mif2; PDBTitle: dimerization domain of mif2p 33 d1uika1 not modelled 94.0 13 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 34 c2gu9B_ not modelled 94.0 18 PDB header:immune system Chain: B: PDB Molecule:tetracenomycin polyketide synthesis protein; PDBTitle: crystal structure of xc5357 from xanthomonas campestris: a2 putative tetracenomycin polyketide synthesis protein3 adopting a novel cupin subfamily structure 35 c1cauB_ not modelled 94.0 20 PDB header:seed storage protein Chain: B: PDB Molecule:canavalin; PDBTitle: determination of three crystal structures of canavalin by molecular2 replacement 36 d1uija2 not modelled 94.0 16 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 37 c2d40C_ not modelled 94.0 18 PDB header:oxidoreductase Chain: C: PDB Molecule:putative gentisate 1,2-dioxygenase; PDBTitle: crystal structure of z3393 from escherichia coli o157:h7 38 c2oa2A_ not modelled 94.0 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:bh2720 protein; PDBTitle: crystal structure of bh2720 (10175341) from bacillus halodurans at2 1.41 a resolution 39 c3i7dB_ not modelled 93.8 14 PDB header:isomerase Chain: B: PDB Molecule:sugar phosphate isomerase; PDBTitle: crystal structure of sugar phosphate isomerase from a cupin2 superfamily spo2919 from silicibacter pomeroyi (yp_168127.1) from3 silicibacter pomeroyi dss-3 at 2.30 a resolution 40 c3kgzA_ not modelled 93.7 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: crystal structure of a cupin 2 conserved barrel domain protein from2 rhodopseudomonas palustris 41 c2o8qA_ not modelled 93.7 16 PDB header:metal binding protein Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a protein with a cupin-like fold and unknown2 function (bxe_c0505) from burkholderia xenovorans lb400 at 1.55 a3 resolution 42 d1x82a_ not modelled 93.6 21 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Glucose-6-phosphate isomerase, GPI 43 c3s7eB_ not modelled 93.6 19 PDB header:allergen Chain: B: PDB Molecule:allergen ara h 1, clone p41b; PDBTitle: crystal structure of ara h 1 44 d1j3pa_ not modelled 93.6 20 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Glucose-6-phosphate isomerase, GPI 45 d1uija1 not modelled 93.5 16 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 46 d2phla2 not modelled 93.3 13 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 47 c3ibmB_ not modelled 93.2 22 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of cupin 2 domain-containing protein hhal_0468 from2 halorhodospira halophila 48 c2eaaB_ not modelled 93.2 18 PDB header:plant protein Chain: B: PDB Molecule:7s globulin-3; PDBTitle: crystal structure of adzuki bean 7s globulin-3 49 c2cauA_ not modelled 93.0 15 PDB header:plant protein Chain: A: PDB Molecule:protein (canavalin); PDBTitle: canavalin from jack bean 50 d1rc6a_ not modelled 92.8 17 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like 51 c1uijA_ not modelled 92.7 21 PDB header:sugar binding protein Chain: A: PDB Molecule:beta subunit of beta conglycinin; PDBTitle: crystal structure of soybean beta-conglycinin beta2 homotrimer (i122m/k124w) 52 c3h7yA_ not modelled 92.5 6 PDB header:biosynthetic protein Chain: A: PDB Molecule:bacilysin biosynthesis protein bacb; PDBTitle: crystal structure of bacb, an enzyme involved in bacilysin synthesis,2 in tetragonal form 53 c2vqaC_ not modelled 92.3 13 PDB header:metal-binding protein Chain: C: PDB Molecule:sll1358 protein; PDBTitle: protein-folding location can regulate mn versus cu- or zn-2 binding. crystal structure of mnca. 54 d1yfua1 not modelled 92.1 19 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:3-hydroxyanthranilic acid dioxygenase-like 55 d1sfna_ not modelled 91.9 12 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like 56 d1j58a_ not modelled 91.8 22 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 57 d2b8ma1 not modelled 91.8 21 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:MJ0764-like 58 c1sefA_ not modelled 91.3 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of cupin domain protein ef2996 from enterococcus2 faecalis 59 d1sefa_ not modelled 91.3 20 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like 60 d1y3ta1 not modelled 91.3 11 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Quercetin 2,3-dioxygenase-like 61 d2phda1 not modelled 90.6 22 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Gentisate 1,2-dioxygenase-like 62 c3kscD_ not modelled 90.1 15 PDB header:plant protein Chain: D: PDB Molecule:lega class; PDBTitle: crystal structure of pea prolegumin, an 11s seed globulin2 from pisum sativum l. 63 d1lr5a_ not modelled 89.9 17 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 64 d2phla1 not modelled 89.9 18 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 65 d3bu7a1 not modelled 89.8 12 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Gentisate 1,2-dioxygenase-like 66 c3bu7A_ not modelled 89.8 12 PDB header:oxidoreductase Chain: A: PDB Molecule:gentisate 1,2-dioxygenase; PDBTitle: crystal structure and biochemical characterization of gdosp,2 a gentisate 1,2-dioxygenase from silicibacter pomeroyi 67 c3l2hD_ not modelled 89.5 24 PDB header:isomerase Chain: D: PDB Molecule:putative sugar phosphate isomerase; PDBTitle: crystal structure of putative sugar phosphate isomerase (afe_0303)2 from acidithiobacillus ferrooxidans atcc 23270 at 1.85 a resolution 68 d1fxza2 not modelled 89.3 13 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 69 d1sq4a_ not modelled 89.2 12 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like 70 d1y9qa2 not modelled 88.8 14 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Probable transcriptional regulator VC1968, C-terminal domain 71 d1od5a2 not modelled 88.8 18 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 72 c3ehkC_ not modelled 88.6 20 PDB header:plant protein Chain: C: PDB Molecule:prunin; PDBTitle: crystal structure of pru du amandin, an allergenic protein2 from prunus dulcis 73 d1uika2 not modelled 88.4 16 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 74 c2oziA_ not modelled 88.2 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein rpa4178; PDBTitle: structural genomics, the crystal structure of a putative2 protein rpa4178 from rhodopseudomonas palustris cga009 75 c1fxzC_ not modelled 87.8 14 PDB header:plant protein Chain: C: PDB Molecule:glycinin g1; PDBTitle: crystal structure of soybean proglycinin a1ab1b homotrimer 76 d2bnma2 not modelled 87.8 17 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1459-like 77 c3qacA_ not modelled 87.7 17 PDB header:plant protein Chain: A: PDB Molecule:11s globulin seed storage protein; PDBTitle: structure of amaranth 11s proglobulin seed storage protein from2 amaranthus hypochondriacus l. 78 d2et1a1 not modelled 87.1 19 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 79 c3h1yA_ not modelled 87.0 10 PDB header:isomerase Chain: A: PDB Molecule:mannose-6-phosphate isomerase; PDBTitle: crystal structure of mannose 6-phosphate isomerase from2 salmonella typhimurium bound to substrate (f6p)and metal3 atom (zn) 80 c3kglB_ not modelled 83.8 14 PDB header:plant protein Chain: B: PDB Molecule:cruciferin; PDBTitle: crystal structure of procruciferin, 11s globulin from2 brassica napus 81 c3c3vA_ not modelled 83.7 20 PDB header:allergen Chain: A: PDB Molecule:arachin arah3 isoform; PDBTitle: crystal structure of peanut major allergen ara h 3 82 c2e9qA_ not modelled 82.6 19 PDB header:plant protein Chain: A: PDB Molecule:11s globulin subunit beta; PDBTitle: recombinant pro-11s globulin of pumpkin 83 c2d5fB_ not modelled 77.1 15 PDB header:plant protein Chain: B: PDB Molecule:glycinin a3b4 subunit; PDBTitle: crystal structure of recombinant soybean proglycinin a3b4 subunit, its2 comparison with mature glycinin a3b4 subunit, responsible for hexamer3 assembly 84 c2bnoA_ not modelled 74.9 19 PDB header:oxidoreductase Chain: A: PDB Molecule:epoxidase; PDBTitle: the structure of hydroxypropylphosphonic acid epoxidase2 from s. wedmorenis. 85 d1zvfa1 not modelled 72.4 21 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:3-hydroxyanthranilic acid dioxygenase-like 86 d1zrra1 not modelled 71.5 24 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Acireductone dioxygenase 87 d1fxza1 not modelled 71.3 18 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 88 d1qwra_ not modelled 59.9 16 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Type I phosphomannose isomerase 89 d1zx5a1 not modelled 56.8 18 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Type I phosphomannose isomerase 90 c2e5yA_ not modelled 54.7 11 PDB header:hydrolase Chain: A: PDB Molecule:atp synthase epsilon chain; PDBTitle: epsilon subunit and atp complex of f1f0-atp synthase from2 the thermophilic bacillus ps3 91 c3es1A_ not modelled 52.2 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of protein with a cupin-like fold and unknown2 function (yp_001165807.1) from novosphingobium aromaticivorans dsm3 12444 at 1.91 a resolution 92 c3cf6E_ not modelled 52.2 20 PDB header:signaling protein/gtp-binding protein Chain: E: PDB Molecule:rap guanine nucleotide exchange factor (gef) 4; PDBTitle: structure of epac2 in complex with cyclic-amp and rap 93 d1od5a1 not modelled 41.7 10 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 94 d1xeaa2 not modelled 39.3 9 Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:Glucose 6-phosphate dehydrogenase-like 95 c3o14B_ not modelled 35.9 14 PDB header:gene regulation Chain: B: PDB Molecule:anti-ecfsigma factor, chrr; PDBTitle: crystal structure of an anti-ecfsigma factor, chrr (maqu_0586) from2 marinobacter aquaeolei vt8 at 1.70 a resolution 96 d1aqta2 not modelled 29.9 14 Fold:Epsilon subunit of F1F0-ATP synthase N-terminal domain Superfamily:Epsilon subunit of F1F0-ATP synthase N-terminal domain Family:Epsilon subunit of F1F0-ATP synthase N-terminal domain 97 d1jmla_ not modelled 26.4 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 98 d1hz6a_ not modelled 25.7 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 99 c2rq7A_ not modelled 25.3 13 PDB header:hydrolase Chain: A: PDB Molecule:atp synthase epsilon chain; PDBTitle: solution structure of the epsilon subunit chimera combining2 the n-terminal beta-sandwich domain from t. elongatus bp-13 f1 and the c-terminal alpha-helical domain from spinach4 chloroplast f1 100 c3irpX_ not modelled 24.4 18 PDB header:cell adhesion Chain: X: PDB Molecule:uro-adherence factor a; PDBTitle: crystal structure of functional region of uafa from staphylococcus2 saprophyticus at 1.50 angstrom resolution 101 c1y9qA_ not modelled 24.2 16 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, hth_3 family; PDBTitle: crystal structure of hth_3 family transcriptional regulator2 from vibrio cholerae 102 c1xctL_ not modelled 23.9 29 PDB header:immune system Chain: L: PDB Molecule:protein l; PDBTitle: complex hcv core-fab 19d9d6-protein l mutant (d55a, l57h, y64w) in2 space group p21212 103 d1mhhe_ not modelled 23.1 29 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 104 d1pg5b2 not modelled 22.6 20 Fold:Rubredoxin-like Superfamily:Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain Family:Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain 105 d1bbpa_ not modelled 22.2 38 Fold:Lipocalins Superfamily:Lipocalins Family:Retinol binding protein-like 106 d2ptla_ not modelled 20.3 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 107 d1ywka1 not modelled 20.3 11 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:KduI-like 108 d1k52a_ not modelled 20.2 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains