Job Description P0C037 Confidence 95.85% Date Thu Jan 5 11:29:39 GMT 2012 Rank 14 Aligned Residues 83 % Identity 18% Template c2pfwB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		F	S	G	K	V	K	S	I	G	F	S	S	S	S	T	G	R	A	S	V	G	V	M	V	E	G	E	.	.	.	Y	T	F	S	T	A	E	P	E	E	M	T	V	I	S	G	A	L	N	V	L	L	P	D	A	T	D	W	Q	V	Y	E	A	G	S	V	F	N	V	P	G	H	S	E	F	H	L	Q	V	A
Query Conservation																													.	.	.
Alig confidence																													.	.	.			.																						.	.
Template Conservation																																		.																						.	.
Template Sequence		I	G	G	G	L	K	R	Q	X	L	G	F	N	H	E	L	X	A	V	K	I	W	F	D	K	G	A	E	G	Y	V	H	.	A	H	R	H	S	Q	V	S	Y	V	V	E	G	E	F	H	V	N	V	D	G	.	.	V	I	K	V	L	T	A	G	D	S	F	F	V	P	P	H	V	D	H	G	A	V	C	P
Template Known Secondary structure			S	T	T										T	T										T	T							.			S	S																T	T	.	.							T	T							T	T								T
Template Predicted Secondary structure																																		.																						.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		85	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	T	S	Y	L	C	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	G	I	L	I	D	T	F
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions