Job Description P00934 Confidence 100.00% Date Thu Jan 5 10:57:12 GMT 2012 Rank 22 Aligned Residues 311 % Identity 18% Template d1wkva1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.00

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		27	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.							.	.	.	.	.	.
Predicted Secondary structure								.	.																																			.																										.	.	.	.	.	.
Query SS confidence								.	.																																			.																										.	.	.	.	.	.
Query Sequence		Q	G	L	F	F	P	.	.	H	D	L	P	E	F	S	L	T	E	I	D	E	M	L	K	L	D	F	V	T	R	S	A	K	I	L	S	A	F	I	G	D	E	.	I	P	Q	E	I	L	E	E	R	V	R	A	A	F	A	F	P	A	P	V	A	N	V	E	S	.	.	.	.	.	.	D	V	G	C	L	E
Query Conservation								.	.																																			.																										.	.	.	.	.	.
Alig confidence								.	.				.								.		.	.	.	.						.	.	.	.	.	.	.	.					.												.	.	.												.	.	.	.	.	.
Template Conservation													.								.		.	.	.	.						.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		G	A	S	R	I	P	V	G	D	G	C	.	S	H	T	L	E	E	L	.	G	.	.	.	.	V	F	D	I	S	.	.	.	.	.	.	.	.	V	P	G	E	M	V	F	P	S	P	L	D	F	F	E	R	.	.	.	G	K	P	T	P	L	V	R	S	R	L	Q	L	P	N	G	V	R	V	W	L	K	L
Template Known Secondary structure		T		S				B	S	S	S		.				T	T	T	T	.	T	.	.	.	.	T	T				.	.	.	.	.	.	.	.	S		T	T				S	S								.	.	.	S		S											S	T	T
Template Predicted Secondary structure													.								.		.	.	.	.						.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.		.					.	.	.	.	.									.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		98	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure							.																									.	.
Query SS confidence							.																									.	.
Query Sequence		L	F	H	G	P	.	T	L	A	F	K	D	F	G	G	R	F	M	A	Q	M	L	T	H	I	A	G	D	K	P	.	.	V	T	I	L	T	A	T	S	G	D	T	G	A	A	V	A	H	A	F	Y	G	L	P	N	V	K	V	V	I	L	Y	P	R	G	K	I	S	P	L	Q	E	K	L	F	C	T	L	G
Query Conservation							.																									.	.
Alig confidence							.													.	.	.										.	.																	.																		.
Template Conservation																				.	.	.																												.																		.
Template Sequence		E	W	Y	N	P	F	S	L	S	V	K	D	R	P	A	V	E	I	.	.	.	I	S	R	L	S	R	R	V	E	K	G	S	L	V	A	D	A	T	S	S	N	F	G	V	A	L	S	.	A	V	A	R	L	Y	G	Y	R	A	R	V	Y	L	P	G	A	.	A	E	E	F	G	K	L	L	P	R	L	L	G
Template Known Secondary structure		G	G	G	S	T	T	T	S	B	T	T								.	.	.					T	T	T	S		T	T																	.						T	T									T	T	.	S											T	T
Template Predicted Secondary structure																				.	.	.																												.																		.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		G	N	I	E	T	V	A	I	D	G	D	F	D	A	C	Q	A	L	V	K	Q	A	F	D	D	E	E	L	K	V	A	L	G	L	N	S	A	N	S	I	N	I	S	.	R	L	L	A	Q	I	C	Y	Y	F	E	A	V	A	Q	L	P	Q	E	T	R	N	Q	L	V	V	S	V	P	S	G	N	F	G	D	L
Query Conservation																																													.
Alig confidence																																					.	.	.	.	.				.
Template Conservation																																					.	.	.	.	.
Template Sequence		A	Q	V	I	V	D	P	E	A	P	S	T	V	H	L	L	P	R	V	M	K	D	S	K	N	E	G	F	V	H	V	N	Q	F	Y	.	.	.	.	.	N	D	A	N	F	E	A	H	M	R	G	T	A	R	E	I	F	V	Q	S	R	R	G	G	L	A	L	R	G	V	A	G	S	L	G	T	S	G	H	M
Template Known Secondary structure								T	T		S	S	S	G	G	G																		T	T	T	.	.	.	.	.											T												T	T											S	S	S
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.						.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	G	L	L	A	K	S	L	G	L	P	V	K	R	F	I	A	A	T	N	V	N	D	T	V	P	R	F	L	H	D	G	Q	W	S	P	K	A	T	Q	A	T	L	S	N	A	M	D	V	S	Q	P	N	N	W	P	R	V	E	E	L	F	R	R	K	I	W	Q	L	K	E	L	G	Y	A	A	V	D	D
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Sequence		S	A	A	A	F	Y	L	Q	S	V	D	P	S	I	R	A	V	L	V	Q	P	A	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	I	P	G	I	R	R	V	E	T	G	M	L	W	I	N	M	L	D	I	S	Y	T	.	.	.	.	.	.	.	.	.	L	A	E	V	T	L
Template Known Secondary structure													T	T										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T				G	G	G			S					S						.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290																		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.										.	.	.	.	.	320
		334	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.					370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure														.																									.	.	.	.
Query SS confidence														.																									.	.	.	.
Query Sequence		E	T	T	Q	Q	T	M	R	E	L	K	E	.	L	G	Y	T	S	E	P	H	A	A	V	A	Y	R	A	L	R	D	Q	L	N	P	G	E	.	.	.	.	Y	G	L	F	L	G	T	A	H	P	A	K	F	K	E	S	V	E	A	I	L
Query Conservation														.																									.	.	.	.
Alig confidence														.																									.	.	.	.
Template Conservation
Template Sequence		E	E	A	M	E	A	V	V	E	V	A	R	S	D	G	L	V	I	G	P	S	G	G	A	A	V	K	A	L	A	K	K	A	A	E	G	D	L	E	P	G	D	Y	V	V	V	V	P	D	T	G	F	K	Y	L	S	L	V	Q	N	A	L
Template Known Secondary structure																S			B																	T	T		S		S									B	B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions