Job Description P00934 Confidence 100.00% Date Thu Jan 5 10:57:12 GMT 2012 Rank 23 Aligned Residues 287 % Identity 16% Template d1ve5a1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.15

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.									.	.	.	.	.	.	.
Query SS confidence																	.	.									.	.	.	.	.	.	.
Query Sequence		P	Q	E	I	L	E	E	R	V	R	A	A	F	A	F	.	.	P	A	P	V	A	N	V	E	.	.	.	.	.	.	.	S	D	V	G	C	L	E	L	F	H	G	P	T	L	A	F	K	D	F	G	G	R	F	M	A	Q	M	L	T	H	I	A	G	D	K	P	V	T	I	L	T	A	T	S	G	D	T	G
Query Conservation																	.	.									.	.	.	.	.	.	.
Alig confidence																	.	.									.	.	.	.	.	.	.																									.	.	.										.	.
Template Conservation																																																										.	.	.										.	.
Template Sequence		S	L	Q	D	L	Y	A	A	F	R	R	I	A	P	Y	T	H	R	T	P	L	L	T	S	R	L	L	D	G	L	L	G	K	R	L	L	L	K	A	E	H	L	Q	K	T	G	S	F	K	A	R	G	A	L	S	K	.	.	.	A	L	A	L	E	N	P	K	G	.	.	L	L	A	V	S	S	G	N	H	A
Template Known Secondary structure														G	G	G	S															T	T	S							G	G	G	S	G	G	G	B	T									.	.	.				S	S	S				.	.						S	S
Template Predicted Secondary structure																																																										.	.	.										.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	A	H	A	F	Y	G	L	P	N	V	K	V	V	I	L	Y	P	R	G	K	I	S	P	L	Q	E	K	L	F	C	T	L	G	G	N	I	E	T	V	A	I	D	G	D	F	D	A	C	Q	A	L	V	K	Q	A	F	D	D	E	E	L	K	V	A	L	G	L	N	S	A	N	S	I	N	I	S	R
Query Conservation
Alig confidence						.																		.			.	.													.	.																															.	.	.	.	.
Template Conservation						.																		.			.	.													.	.																															.	.	.	.	.
Template Sequence		Q	G	V	A	.	Y	A	A	Q	V	L	G	V	K	A	L	V	V	M	P	E	D	.	P	Y	.	.	K	K	A	C	A	R	A	Y	G	A	E	V	.	.	V	D	R	G	V	T	A	K	N	R	E	E	V	A	R	A	L	Q	E	E	T	G	Y	A	L	I	H	P	F	D	.	.	.	.	.	D	P	L	V
Template Known Secondary structure						.							T											.			.	.								T	T				.	.			T	T			T	T	T																			S	S	S	.	.	.	.	.	S
Template Predicted Secondary structure						.																		.			.	.													.	.																															.	.	.	.	.
Template SS confidence
		78	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100			.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.						.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.
Predicted Secondary structure																																																													.																			.
Query SS confidence																																																													.																			.
Query Sequence		L	L	A	Q	I	C	Y	Y	F	E	A	V	A	Q	L	P	Q	E	T	R	N	Q	L	V	V	S	V	P	S	G	N	F	G	D	L	T	A	G	L	L	A	K	S	L	G	L	P	V	K	R	F	I	A	A	T	N	V	N	D	.	T	V	P	R	F	L	H	D	G	Q	W	S	P	K	A	T	Q	A	.	T
Query Conservation																																																													.																			.
Alig confidence																																																													.																			.
Template Conservation
Template Sequence		I	A	G	Q	G	T	A	G	L	E	L	L	A	Q	A	G	R	M	G	V	F	P	G	A	V	L	A	P	V	G	G	G	G	L	L	A	G	L	A	T	A	V	K	A	L	S	P	T	T	L	V	L	G	V	E	P	E	A	A	D	D	A	K	R	S	L	E	A	G	R	I	L	R	L	E	A	P	P	R	T
Template Known Secondary structure																				T				S							S	S	S															T	T	S								G	G	G										T	S					S	S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure																																																			.																				.
Query SS confidence																																																			.																				.
Query Sequence		L	S	N	A	M	D	V	S	Q	P	N	N	W	P	R	V	E	E	L	F	R	R	K	I	W	Q	L	K	E	L	G	Y	A	A	V	D	D	E	T	T	Q	Q	T	M	R	E	L	K	E	.	L	G	Y	T	S	E	P	H	A	A	V	A	Y	R	A	L	R	D	Q	.	L	N	P	G	E	Y	G	L	F	L
Query Conservation																																																			.																				.
Alig confidence																.	.											.	.	.	.	.																			.																				.
Template Conservation																.	.											.	.	.	.	.
Template Sequence		R	A	D	G	V	R	T	L	S	L	G	E	R	T	.	.	F	P	I	L	R	E	R	V	D	G	.	.	.	.	.	I	L	T	V	S	E	E	A	L	L	E	A	E	R	L	L	F	T	R	T	K	Q	V	V	E	P	T	G	A	L	P	L	A	A	V	L	E	H	G	A	R	L	P	Q	T	L	A	L	L
Template Known Secondary structure		S		G	G	G			S	S			T	T	T	.	.											.	.	.	.	.																				T						G	G	G	G										G	G	G	S		S
Template Predicted Secondary structure																.	.											.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		375	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	G
Template Known Secondary structure				B
Template Predicted Secondary structure
Template SS confidence
		302	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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