Job Description P00934 Confidence 100.00% Date Thu Jan 5 10:57:12 GMT 2012 Rank 5 Aligned Residues 341 % Identity 18% Template d1v8za1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.21

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		25	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.									90	.	.
Predicted Secondary structure															.	.	.	.																																																					.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.																																																					.	.	.	.	.	.	.	.
Query Sequence		K	N	Q	G	L	F	F	P	H	D	L	P	E	.	.	.	.	F	S	L	T	E	I	D	E	M	L	K	L	D	F	V	T	R	S	A	K	I	L	S	A	F	I	G	D	E	I	P	Q	E	I	L	E	E	R	V	R	A	A	F	A	F	P	A	P	V	A	N	V	.	.	.	.	.	.	.	.	E	S	D
Query Conservation															.	.	.	.																																																					.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	G	G	Q	Y	V	P	E	T	L	I	E	P	L	K	E	L	E	K	A	Y	K	R	F	K	D	D	E	E	F	N	R	Q	L	N	Y	Y	L	K	T	W	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	P	T	P	L	Y	Y	A	K	R	L	T	E	K	I	G	G	A	K
Template Known Secondary structure		T																										T															T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S														T	S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		V	G	C	L	E	L	F	H	G	P	T	L	A	F	K	D	F	G	G	R	F	M	A	Q	M	L	T	H	I	A	G	D	K	P	V	T	I	L	T	A	T	S	G	D	T	G	A	A	V	A	H	A	F	Y	G	L	P	N	V	K	V	V	I	L	Y	P	R	G	.	.	K	I	S	P	L	Q	E	K	L	F
Query Conservation																																																																						.	.
Alig confidence																														.	.																					.																		.	.
Template Conservation																														.	.																					.
Template Sequence		I	Y	L	K	R	E	D	L	V	H	G	G	A	H	K	T	N	N	A	I	G	Q	A	L	L	A	K	F	.	.	M	G	K	T	R	L	I	A	E	T	G	A	G	Q	H	G	V	A	T	A	.	M	A	G	A	L	L	G	M	K	V	D	I	Y	M	G	A	E	D	V	E	R	Q	K	M	N	V	F	R	M
Template Known Secondary structure							G	G	G	S	T	T	S	B	T															.	.	T	T									S	S	S								.						T	T													T	T
Template Predicted Secondary structure																														.	.																					.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		171	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.
Predicted Secondary structure												.									.																												.	.																						.
Query SS confidence												.									.																												.	.																						.
Query Sequence		C	T	L	G	G	N	I	E	T	V	.	A	I	D	G	D	F	D	A	.	C	Q	A	L	V	K	Q	A	F	D	D	E	E	L	K	V	A	L	G	L	N	S	A	N	S	I	N	.	.	I	S	R	L	L	A	Q	I	C	Y	Y	F	E	A	V	A	Q	L	P	Q	E	.	T	R	N	Q	L	V	V	S	V
Query Conservation												.									.																												.	.																						.
Alig confidence												.									.																												.	.																						.
Template Conservation
Template Sequence		K	L	L	G	A	N	V	I	P	V	N	S	G	S	R	T	L	K	D	A	I	N	E	A	L	R	D	W	V	A	T	F	E	Y	T	H	Y	L	I	G	S	V	V	G	P	H	P	Y	P	T	I	V	R	D	F	Q	S	V	I	G	R	E	A	K	A	Q	I	L	E	A	E	G	Q	L	P	D	V	I	V	A
Template Known Secondary structure				T	T								S	T	T	S	S																T	T	T							S	S		S	S	T	T																									S	S			S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.																			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	S	G	N	F	G	D	L	T	A	G	L	L	A	K	S	L	G	L	P	V	K	R	F	I	A	A	T	N	V	N	D	T	V	P	R	F	L	H	D	G	Q	W	S	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	Q	A	T	L	S	N	A	M	D	V	S	Q	P	N
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		C	V	G	G	G	S	N	A	M	G	I	F	Y	P	F	V	.	N	D	K	K	V	K	L	V	G	V	E	A	G	G	K	G	L	E	S	G	K	H	S	A	S	L	N	A	G	Q	V	G	V	F	H	G	M	L	S	Y	F	L	Q	D	E	E	G	Q	I	K	P	T	H	S	I	A	P	G	L	D	Y	P	G
Template Known Secondary structure				S	S	S								G	G	G	T	.	T		T	T	S										T	B	G	G	G	T	B	S													T	T							B		T	T	S		B						S	S	T	T	S			S	B
Template Predicted Secondary structure																		.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.				.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																								.																				.	.	.
Query SS confidence																																								.																				.	.	.
Query Sequence		N	W	P	R	V	E	E	L	F	R	R	K	I	W	Q	L	K	E	L	G	Y	A	A	V	D	D	E	T	T	Q	Q	T	M	R	E	L	K	E	.	L	G	Y	T	S	E	P	H	A	A	V	A	Y	R	A	L	R	D	Q	.	.	.	L	N	P	G	E	Y	G	L	F	L	G	T	A	H	P	A	K	F	K
Query Conservation																																								.																				.	.	.
Alig confidence																	.	.	.	.	.																			.																				.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		V	G	P	E	H	A	Y	L	K	K	I	Q	R	A	E	.	.	.	.	.	Y	V	T	V	T	D	E	E	A	L	K	A	F	H	E	L	S	R	T	E	G	I	I	P	A	L	E	S	A	H	A	V	A	Y	A	M	K	L	A	K	E	M	S	R	D	E	I	I	I	V	N	L	S	G	R	G	D	K	D	L
Template Known Secondary structure												T	T	S			.	.	.	.	.																					S			B																	T	S		T	T									B	B	S	G	G	G
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.						.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		384	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	V	E	A	I	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	V	L	K	V	S	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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