Job Description P00934 Confidence 100.00% Date Thu Jan 5 10:57:12 GMT 2012 Rank 18 Aligned Residues 289 % Identity 14% Template d1p5ja_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.50

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		80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		F	A	F	P	A	P	V	A	N	V	.	.	.	.	.	.	.	E	S	D	V	G	C	L	E	L	F	H	G	P	T	L	A	F	K	D	F	G	G	R	F	M	A	Q	M	L	T	H	I	A	G	D	K	P	V	T	I	L	T	A	T	S	G	D	T	G	A	A	V	A	H	A	F	Y	G	L	P	N	V	K
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																										.	.	.																												.
Template Conservation																																												.	.	.																												.
Template Sequence		L	H	V	K	T	P	I	R	D	S	M	A	L	S	K	M	A	G	T	S	V	Y	L	K	M	D	S	A	Q	P	S	G	S	F	K	I	R	G	I	G	H	F	.	.	.	C	K	R	W	A	K	Q	G	C	A	H	F	V	C	S	S	A	G	N	A	G	M	A	A	A	Y	A	.	A	R	Q	L	G	V	P
Template Known Secondary structure		S	S																T	S							G	G	G	S	G	G	G	B	T	T								.	.	.							T	T									S	S										.					T
Template Predicted Secondary structure																																												.	.	.																												.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		V	V	I	L	Y	P	R	G	K	I	S	P	L	Q	E	K	L	F	C	T	L	G	G	N	I	E	T	V	A	I	D	G	D	F	D	A	C	Q	A	L	V	K	Q	A	F	D	D	E	.	E	L	K	V	A	L	G	L	N	S	A	N	S	I	N	I	S	R	L	L	A	Q	I	C	Y	Y	F	E	A	V	A
Query Conservation																																																		.
Alig confidence										.																	.	.																						.										.	.	.	.	.
Template Conservation										.																	.	.																																.	.	.	.	.
Template Sequence		A	T	I	V	V	P	G	T	.	T	P	A	L	T	I	E	R	L	K	N	E	G	A	T	C	.	.	K	V	V	G	E	L	L	D	E	A	F	E	L	A	K	A	L	A	K	N	N	P	G	W	V	Y	I	P	P	F	D	.	.	.	.	.	D	P	L	I	W	E	G	H	A	S	I	V	K	E	L	K	E
Template Known Secondary structure								T	T	.												T	T				.	.					S																S	T	T						S	S		.	.	.	.	.									T
Template Predicted Secondary structure										.																	.	.																																.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.																.
Query SS confidence																																	.																.
Query Sequence		Q	L	P	Q	E	T	R	N	Q	L	V	V	S	V	P	S	G	N	F	G	D	L	T	A	G	L	L	A	K	S	L	.	G	L	P	V	K	R	F	I	A	A	T	N	V	N	D	.	T	V	P	R	F	L	H	D	G	Q	W	S	P	K	A	T	Q	A	T	L	S	N	A	M	D	V	S	Q	P	N	N	W
Query Conservation																																	.																.
Alig confidence				.	.	.																											.																.
Template Conservation				.	.	.
Template Sequence		T	L	.	.	.	W	E	K	P	G	A	I	A	L	S	V	G	G	G	G	L	L	C	G	V	V	Q	G	L	Q	E	C	G	W	G	D	V	P	V	I	A	M	E	T	F	G	A	H	S	F	H	A	A	T	T	A	G	K	L	V	S	L	P	K	I	T	S	V	A	K	A	L	G	V	K	T	V	G	S	Q
Template Known Secondary structure				.	.	.	S	S			S							S	S	S													T	T		T	T									T	T	S										T	S					S					S		G	G	G			S	S
Template Predicted Secondary structure				.	.	.
Template SS confidence
		155	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.												.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																																				.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	V	E	E	L	F	R	R	K	I	W	Q	L	K	E	L	G	Y	A	A	V	D	D	E	T	T	Q	Q	T	M	R	E	L	.	K	E	L	G	Y	T	S	E	P	H	A	A	V	A	Y	R	A	L	R	.	.	.	.	.	.	.	.	.	.	.	D	Q	L	N	P	G	E	Y	G	L	F	L	G	T	A
Query Conservation																																				.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.											.	.	.	.	.																	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.											.	.	.	.	.
Template Sequence		A	.	.	L	K	L	F	Q	E	H	P	I	F	.	.	.	.	.	S	E	V	I	S	D	Q	E	A	V	A	A	I	E	K	F	V	D	D	E	K	I	L	V	E	P	A	C	G	A	A	L	A	A	V	Y	S	H	V	I	Q	K	L	Q	L	E	G	N	L	R	T	P	L	P	S	L	V	V	I	V	C	G
Template Known Secondary structure			.	.							S				.	.	.	.	.																				T																	T	T								T	T	S	S		S	S		S								B
Template Predicted Secondary structure			.	.											.	.	.	.	.
Template SS confidence
		232			.	.	.	.	.	.	.	240	.	.						.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		378	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	A	K	F	K	E	S	V	E	A	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	N	I	S	L	A	Q	L	R	A	L	K
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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