Job Description P00934 Confidence 99.96% Date Thu Jan 5 10:57:12 GMT 2012 Rank 38 Aligned Residues 275 % Identity 17% Template d1f2da_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.00

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		82	.	.	.	.	.	.	.	90	.										.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.																.	.	.																										.	.
Query SS confidence												.	.	.	.	.	.	.	.	.																.	.	.																										.	.
Query Sequence		F	P	A	P	V	A	N	V	E	S	.	.	.	.	.	.	.	.	.	D	V	G	C	L	E	L	F	H	G	P	T	L	A	F	.	.	.	K	D	F	G	G	R	F	M	A	Q	M	L	T	H	I	A	G	D	K	P	V	T	I	L	T	.	.	A	T	S	G	D	T	G	A	A	V	A	H	A	F	Y	G
Query Conservation												.	.	.	.	.	.	.	.	.																.	.	.																										.	.
Alig confidence												.	.	.	.	.	.	.	.	.																.	.	.									.	.	.															.	.												.
Template Conservation																																															.	.	.																												.
Template Sequence		G	P	S	P	I	S	N	L	N	R	L	S	Q	H	L	G	S	K	V	N	V	Y	A	K	R	E	D	C	N	S	G	L	A	F	G	G	N	K	L	R	K	L	E	Y	I	.	.	.	V	P	D	I	V	E	G	D	Y	T	H	L	V	S	I	G	G	R	Q	S	N	Q	T	R	M	V	A	.	A	L	A	A
Template Known Secondary structure		S	S													T	T	T		S							G	G	G	S		S	S	T	T									T	T	T	.	.	.							S			S								T	T									.
Template Predicted Secondary structure																																															.	.	.																												.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.												.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Query Sequence		L	P	N	V	K	V	V	I	L	Y	P	R	G	K	I	S	P	L	Q	E	K	.	.	.	.	.	.	.	.	.	.	.	L	F	C	T	L	G	G	N	I	E	T	V	A	I	D	G	D	F	D	A	C	Q	A	L	V	K	Q	A	F	D	D	E	E	L	K	V	A	L	G	.	.	.	L	N	S	A	N	S
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Alig confidence															.								.	.	.	.	.	.	.	.	.	.	.												.	.																											.	.	.
Template Conservation															.																														.	.
Template Sequence		K	L	G	K	K	C	V	L	I	Q	E	D	W	.	V	P	I	P	E	A	E	K	D	V	Y	N	R	V	G	N	I	E	L	S	R	I	M	G	A	D	V	R	V	.	.	I	E	D	G	F	D	I	G	M	R	K	S	F	A	N	A	L	Q	E	L	E	D	A	G	H	K	P	Y	P	I	P	A	G	C	S
Template Known Secondary structure				T											.	S				G	G	G	T	T	T	T	T	T	S									T	T						.	.							S	S															T	T								G	G	G	T
Template Predicted Secondary structure															.																														.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		I	N	I	S	R	L	L	A	Q	I	C	Y	Y	F	E	A	V	A	Q	L	P	Q	E	T	R	N	Q	L	V	V	S	V	P	S	G	N	F	G	D	L	T	A	G	L	L	A	K	S	L	G	L	P	V	K	R	F	I	A	A	T	N	V	N	D	.	T	V	P	R	F	L	H	D	G	Q	W	S	P	K	A
Query Conservation																																																																		.
Alig confidence																																																																		.										.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		E	H	K	Y	G	G	L	G	F	V	G	F	A	D	E	V	I	N	Q	E	V	E	L	G	I	K	F	D	K	I	V	V	C	C	V	T	G	S	T	T	A	G	I	L	A	G	M	A	Q	Y	G	R	Q	D	D	V	I	A	I	D	A	S	F	T	S	E	K	T	K	E	Q	T	L	R	.	.	.	.	.	.
Template Known Secondary structure		T	S	T	T	T	T	T																	T				S							S	S	S											G	G	G	T		G	G	G							S	S												.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.						.
Predicted Secondary structure																																																							.									.												.	.	.	.	.
Query SS confidence																																																							.									.												.	.	.	.	.
Query Sequence		T	Q	A	T	L	S	N	A	M	D	V	S	Q	P	N	N	W	P	R	V	E	E	L	F	R	R	K	I	W	Q	L	K	E	L	G	Y	A	A	V	D	D	E	T	T	Q	Q	T	M	R	E	L	K	E	.	L	G	Y	T	S	E	P	H	.	A	A	V	A	Y	R	A	L	R	D	Q	.	.	.	.	.	L
Query Conservation																																																							.									.												.	.	.	.	.
Alig confidence																			.	.	.											.	.	.	.	.																			.									.												.	.	.	.	.
Template Conservation																			.	.	.											.	.	.	.	.
Template Sequence		I	A	N	N	T	A	K	L	I	G	V	E	H	E	F	K	D	.	.	.	F	T	L	D	T	R	F	A	Y	P	.	.	.	.	.	C	Y	G	V	P	N	E	G	T	I	E	A	I	R	T	C	A	E	Q	E	G	V	L	T	D	P	V	Y	E	G	K	S	M	Q	G	L	I	A	L	I	K	E	D	Y	F
Template Known Secondary structure											T						S		.	.	.						T	T	S	T	T	.	.	.	.	.	B	T	T	B																	S					T	T	T														T	T		S
Template Predicted Secondary structure																			.	.	.											.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.						.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		366	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	G	E	Y	G	L	F	L	G	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	G	A	N	V	L	Y	V	H	L	G
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions