Return to main results Retrieve Phyre Job Id

Job DescriptionP00934
Confidence24.35%DateThu Jan 5 10:57:12 GMT 2012
Rank129Aligned Residues74
% Identity18%Templatec3uf0A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of a putative nad(p) dependent gluconate 5-2 dehydrogenase from beutenbergia cavernae(efi target efi-502044) with3 bound nadp (low occupancy)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160.........170.........180.........190.........
Predicted Secondary structure 






















Query SS confidence 











































































Query Sequence  DKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDD
Query Conservation       

 






 


 
     

   

 
 
 

  
  

   



  
 
 
 


 
  

    
Alig confidence 
























.










.





































Template Conservation   

 






 


  

  
   .

 


  
  .        
            
                
Template Sequence  AGRTAVVTGAGSGIGRAIAHGYARA. GAHVLAWGRTD. GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAA
Template Known Secondary structure  TT
TTTST.T
SST.TTT


TT
Template Predicted Secondary structure 







.



.























Template SS confidence 











































































   8.10.........20.........30.. .......40... ......50.........60.........70.........80.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions