Job Description P00934 Confidence 100.00% Date Thu Jan 5 10:57:12 GMT 2012 Rank 24 Aligned Residues 298 % Identity 16% Template c3iauA_ PDB info PDB header:lyase Chain: A: PDB Molecule:threonine deaminase; PDBTitle: the structure of the processed form of threonine deaminase isoform 22 from solanum lycopersicum Resolution 2.35 Å

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		69	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.								.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.									.	.	.	.	.	.	.
Query SS confidence														.	.	.									.	.	.	.	.	.	.
Query Sequence		Q	E	I	L	E	E	R	V	R	A	A	F	.	.	.	A	F	P	A	P	V	A	N	.	.	.	.	.	.	.	V	E	S	D	V	G	C	L	E	L	F	H	G	P	T	L	A	F	K	D	F	G	G	R	F	M	A	Q	M	L	T	H	I	A	G	D	K	P	V	T	I	L	T	A	T	S	G	D	T	G
Query Conservation														.	.	.									.	.	.	.	.	.	.
Alig confidence														.	.	.									.	.	.	.	.	.	.																											.	.	.
Template Conservation																																																										.	.	.
Template Sequence		F	Q	Y	L	V	D	I	L	A	S	P	V	Y	D	V	A	I	E	S	P	L	E	L	A	E	K	L	S	D	R	L	G	V	N	F	Y	I	K	R	E	D	K	Q	R	V	F	S	F	L	R	G	A	Y	N	M	M	.	.	.	S	N	L	S	R	E	E	L	D	K	G	V	I	T	A	S	A	G	N	H	A
Template Known Secondary structure													G	G	G	T																	T	S							G	G	G	S	T	T	S	B										.	.	.		T	S														S	S
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	A	H	A	F	Y	G	L	P	N	V	K	V	V	I	L	Y	P	R	G	K	I	S	P	L	Q	E	K	L	F	C	T	L	G	G	N	I	E	T	V	A	I	D	G	D	F	D	A	C	Q	A	L	V	K	Q	A	F	D	D	E	E	L	K	V	A	L	G	L	N	S	A	N	S	I	N	I	S	R
Query Conservation
Alig confidence								.																.																	.	.																															.	.	.	.	.
Template Conservation								.																.																	.	.																															.	.	.	.	.
Template Sequence		Q	G	V	A	L	A	.	G	Q	R	L	N	C	V	A	K	I	V	M	P	T	T	.	T	P	Q	I	K	I	D	A	V	R	A	L	G	G	D	V	.	.	V	L	Y	G	K	T	F	D	E	A	Q	T	H	A	L	E	L	S	E	K	D	G	L	K	Y	I	P	P	F	D	.	.	.	.	.	D	P	G	V
Template Known Secondary structure								.				T	T									T	T	.												T	T				.	.					S	S																T						S	S	S	.	.	.	.	.	S
Template Predicted Secondary structure								.																.																	.	.																															.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.						.	.	190	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		L	L	A	Q	I	C	Y	Y	F	E	A	V	A	Q	L	P	Q	E	T	R	N	Q	L	V	V	S	V	P	S	G	N	F	G	D	L	T	A	G	L	L	A	K	S	L	G	L	P	V	K	R	F	I	A	A	T	N	V	N	D	.	T	V	P	R	F	L	H	D	G	Q	W	S	P	K	A	T	Q	A	T	L
Query Conservation																																																													.
Alig confidence																	.	.	.	.																																									.
Template Conservation																	.	.	.	.
Template Sequence		I	K	G	Q	G	T	I	G	T	E	I	N	R	Q	L	.	.	.	.	K	D	I	H	A	V	F	I	P	V	G	G	G	G	L	I	A	G	V	A	T	F	F	K	Q	I	A	P	N	T	K	I	I	G	V	E	P	Y	G	A	A	S	M	T	L	S	L	H	E	G	H	R	V	K	L	S	N	V	D	T	F
Template Known Secondary structure																	.	.	.	.		S									S	S	S														S	T	T	S								G	G	G										T	S					S					S
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.					.	.	.	370	.	.
Predicted Secondary structure																																																		.																						.	.	.	.
Query SS confidence																																																		.																						.	.	.	.
Query Sequence		S	N	A	M	D	V	S	Q	P	N	N	W	P	R	V	E	E	L	F	R	R	K	I	W	Q	L	K	E	L	G	Y	A	A	V	D	D	E	T	T	Q	Q	T	M	R	E	L	K	E	.	L	G	Y	T	S	E	P	H	A	A	V	A	Y	R	A	L	R	D	Q	L	N	.	.	.	.	P	G	E	Y	G	L
Query Conservation																																																		.																						.	.	.	.
Alig confidence												.	.														.	.	.	.	.																			.																						.	.	.	.
Template Conservation												.	.														.	.	.	.	.
Template Sequence		A	D	G	V	A	V	A	L	V	G	.	.	E	Y	T	F	A	K	C	Q	E	L	I	D	G	.	.	.	.	.	M	V	L	V	A	N	D	G	I	S	A	A	I	K	D	V	Y	D	E	G	R	N	I	L	E	T	S	G	A	V	A	I	A	G	A	A	A	Y	C	E	F	Y	K	I	K	N	E	N	I	V
Template Known Secondary structure		S	G	G	G			S	S			.	.														.	.	.	.	.																					S																					T	T			S
Template Predicted Secondary structure												.	.														.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290						.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	G	T	A	H	P	A	K	F	K	E	S	V	E	A	I	L
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		A	I	A	S	G	.	A	N	M	D	F	S	K	L	H	K	V	T
Template Known Secondary structure						B	.					G	G	G
Template Predicted Secondary structure							.
Template SS confidence
		341	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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