Job Description P00934 Confidence 100.00% Date Thu Jan 5 10:57:12 GMT 2012 Rank 8 Aligned Residues 297 % Identity 20% Template c2zsjB_ PDB info PDB header:lyase Chain: B: PDB Molecule:threonine synthase; PDBTitle: crystal structure of threonine synthase from aquifex aeolicus vf5 Resolution 1.80 Å

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		83	.	.	.	.	.	.	90	.										.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.
Query Sequence		P	A	P	V	A	N	V	E	S	.	.	.	.	.	.	.	.	.	D	V	G	C	L	E	L	F	H	G	P	T	L	A	F	K	D	F	G	G	R	F	M	A	Q	M	L	T	H	I	A	G	D	K	P	V	T	I	L	T	A	T	S	G	D	T	G	A	A	V	A	H	A	F	Y	G	L	P	N	V	K	V
Query Conservation											.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																								.	.	.																												.
Template Conservation																																											.	.	.																												.
Template Sequence		N	T	P	L	I	E	A	D	N	L	A	R	A	I	G	F	K	G	K	I	Y	L	K	Y	E	G	L	N	P	T	G	S	F	K	D	R	G	M	T	L	A	.	.	.	I	S	K	A	V	E	A	G	K	R	A	V	I	C	A	S	T	G	N	T	S	A	S	A	A	A	Y	.	A	A	R	A	G	L	R	A
Template Known Secondary structure																T		S	S							G	G	G	S	T	T	S	B	T									.	.	.							T	T		S							S	S										.				T	T
Template Predicted Secondary structure																																											.	.	.																												.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	L	Y	P	R	G	K	I	S	P	L	Q	E	K	L	F	C	T	L	G	G	N	I	E	T	V	A	I	D	G	D	F	D	A	C	Q	A	L	V	K	Q	A	F	D	D	E	E	L	K	V	A	L	G	L	N	S	A	N	S	I	N	I	S	R	L	L	A	Q	I	C	Y	Y	F	E	A	V	A	Q	L
Query Conservation
Alig confidence																												.	.																			.	.	.	.	.	.
Template Conservation																												.	.																			.	.	.	.	.	.
Template Sequence		Y	V	L	L	P	K	G	A	V	A	I	G	K	L	S	Q	A	M	I	Y	G	A	K	V	L	A	.	.	I	Q	G	T	F	D	D	A	L	N	I	V	R	K	I	G	E	N	.	.	.	.	.	.	F	P	V	E	I	V	N	S	V	N	P	Y	R	I	E	G	Q	K	T	A	A	F	E	I	C	D	T	L
Template Known Secondary structure							T	T	T			G	G	G	T						T	T						.	.		S	S																.	.	.	.	.	.	S	S					S	T	T		T							T
Template Predicted Secondary structure																												.	.																			.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.							.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.											.
Query SS confidence																																				.	.	.	.	.	.											.
Query Sequence		P	Q	E	T	R	N	Q	L	V	V	S	V	P	S	G	N	F	G	D	L	T	A	G	L	L	A	K	S	L	G	L	P	V	K	.	.	.	.	.	.	R	F	I	A	A	T	N	V	N	D	.	T	V	P	R	F	L	H	D	G	Q	W	S	P	K	A	T	Q	A	T	L	S	N	A	M	D	V	S	Q	P
Query Conservation																																				.	.	.	.	.	.											.
Alig confidence		.	.	.																																.	.	.	.	.	.											.											.	.	.	.	.	.
Template Conservation		.	.	.																																																											.	.	.	.	.	.
Template Sequence		.	.	.	G	E	A	P	D	Y	H	F	I	P	V	G	N	A	G	N	I	T	A	Y	W	K	G	F	K	I	Y	Y	E	E	G	K	I	T	K	L	P	R	M	M	G	W	Q	A	E	G	A	A	P	I	V	K	G	Y	P	I	K	N	.	.	.	.	.	.	P	Q	T	I	A	T	A	I	K	I	G	N	P
Template Known Secondary structure		.	.	.	S	S			S							S	S	S																T	T	S		S	S										G	G	G						T	S			S	S	.	.	.	.	.	.				S		G	G	G			S	S
Template Predicted Secondary structure		.	.	.																																																											.	.	.	.	.	.
Template SS confidence
					178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.							.	.	.	.	240	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.						.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																																									.																				.	.	.	.	.
Query SS confidence																																									.																				.	.	.	.	.
Query Sequence		N	N	W	P	R	V	E	E	L	F	R	R	K	I	W	Q	L	K	E	L	G	Y	A	A	V	D	D	E	T	T	Q	Q	T	M	R	E	L	K	E	.	L	G	Y	T	S	E	P	H	A	A	V	A	Y	R	A	L	R	D	Q	.	.	.	.	.	L	N	P	G	E	Y	G	L	F	L	G	T	A	H	P	A
Query Conservation																																									.																				.	.	.	.	.
Alig confidence																		.	.	.	.	.																			.																				.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		Y	S	W	K	S	A	L	K	A	A	Q	E	S	G	G	K	.	.	.	.	.	I	D	A	V	S	D	S	E	I	L	Y	A	Y	K	L	I	A	S	T	E	G	V	F	C	E	P	A	S	A	A	S	V	A	G	L	I	K	L	V	R	E	G	F	F	K	G	G	E	V	V	T	C	T	L	T	G	N	G	L
Template Known Secondary structure		T	T												T			.	.	.	.	.																								B		G	G	G	G												T	T				S										B	B	G	G
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.						.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	K	E	S	V	E	A	I	L	G	E	T	L	D	L	P	K	E	L	A	E	R	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	P	D	T	A	I	K	V	C	E	E	P	I	T	V	P	P	D	F	D	E	V	V	K
Template Known Secondary structure		G								T									S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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