Return to main results Retrieve Phyre Job Id

Job DescriptionP00934
Confidence57.74%DateThu Jan 5 10:57:12 GMT 2012
Rank56Aligned Residues115
% Identity17%Templatec2vkzC_
PDB info PDB header:transferaseChain: C: PDB Molecule:fatty acid synthase subunit alpha; PDBTitle: structure of the cerulenin-inhibited fungal fatty acid2 synthase type i multienzyme complex
Resolution4.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   84.....90.........100.........110.........120..... ....130.. .......140.........150.......
Predicted Secondary structure 













.....

.







Query SS confidence 









































. . . . .






.
























Query Sequence  APVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAGDK. . . . . PVTILTA. TSGDTGAAVAHAFYGLPNVKVVILY
Query Conservation   

  
      







 



        

       .....   

 
.





 


 
     

   

 
Alig confidence 









































.....






.















.







Template Conservation         
 


  
   
 
     

      
      
 



 







 



  


 

  .

  



Template Sequence  TIPRETIPFLHLRKKTPAGDWKYDRQLSSLFLDGLEKAAFNGVTFKDKYVLITGAGKGSIGAEVLQGLLQG. GAKVVVTT
Template Known Secondary structure  GS
TT


SS
TTS

T
B

TT
S

SSST.T
Template Predicted Secondary structure 






























.


Template SS confidence 















































































   629630.........640.........650.........660.........670.........680.........690......... 700.......
 
   158.160.... .....170.........180... ......190.........200.
Predicted Secondary structure 





.......

.




Query SS confidence 






. . . . . . .


















.

















Query Sequence  PRGKISP. . . . . . . LQEKLFCTLGGNIETVAID. GDFDACQALVKQAFDDEE
Query Conservation 
 
 

 ....... 
  

   



  
 
 .
 


 
  

    
  
Alig confidence  ..




.......


















.

















Template Conservation  ..

           
   
   

 
 
   



  

 


  
    
Template Sequence  . . SRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEK
Template Known Secondary structure  ..SS



TT


TT
S
TT
Template Predicted Secondary structure  ..














Template SS confidence 



















































   708.710.........720.........730.........740.........750.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions