Job Description P00934 Confidence 68.78% Date Thu Jan 5 10:57:12 GMT 2012 Rank 47 Aligned Residues 117 % Identity 17% Template c2uv8C_ PDB info PDB header:transferase Chain: C: PDB Molecule:fatty acid synthase subunit alpha (fas2); PDBTitle: crystal structure of yeast fatty acid synthase with stalled2 acyl carrier protein at 3.1 angstrom resolution Resolution 3.10 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.								.
Query SS confidence																																														.	.	.	.	.								.
Query Sequence		F	P	A	P	V	A	N	V	E	S	D	V	G	C	L	E	L	F	H	G	P	T	L	A	F	K	D	F	G	G	R	F	M	A	Q	M	L	T	H	I	A	G	D	K	.	.	.	.	.	P	V	T	I	L	T	A	.	T	S	G	D	T	G	A	A	V	A	H	A	F	Y	G	L	P	N	V	K	V	V	I
Query Conservation																																														.	.	.	.	.								.
Alig confidence																																														.	.	.	.	.								.																	.
Template Conservation																																																																											.
Template Sequence		S	S	T	I	P	R	E	T	I	P	F	L	H	L	R	K	K	T	P	A	G	D	W	K	Y	D	R	Q	L	S	S	L	F	L	D	G	L	E	K	A	A	F	N	G	V	T	F	K	D	K	Y	V	L	I	T	G	A	G	K	G	S	I	G	A	E	V	L	Q	G	L	L	Q	G	.	G	A	K	V	V	V
Template Known Secondary structure		G	G	G	S		T	T				S	S							T	T	S																						T		B			T	T							S			S	S	S												T	.	T
Template Predicted Secondary structure																																																																											.
Template SS confidence
		627	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.		700	.	.	.	.	.
		156	.	.	.	160	.	.	.	.								.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure											.	.	.	.	.	.	.																				.
Query SS confidence											.	.	.	.	.	.	.																				.
Query Sequence		L	Y	P	R	G	K	I	S	P	.	.	.	.	.	.	.	L	Q	E	K	L	F	C	T	L	G	G	N	I	E	T	V	A	I	D	.	G	D	F	D	A	C	Q	A	L	V	K	Q	A	F	D	D	E	E
Query Conservation											.	.	.	.	.	.	.																				.
Alig confidence				.	.						.	.	.	.	.	.	.																				.
Template Conservation				.	.
Template Sequence		T	T	.	.	S	R	F	S	K	Q	V	T	D	Y	Y	Q	S	I	Y	A	K	Y	G	A	K	G	S	T	L	I	V	V	P	F	N	Q	G	S	K	Q	D	V	E	A	L	I	E	F	I	Y	D	T	E	K
Template Known Secondary structure				.	.	S	S																			T	T										T	T														S		T	T
Template Predicted Secondary structure				.	.
Template SS confidence
		706	.			.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions