Job Description P00934 Confidence 100.00% Date Thu Jan 5 10:57:12 GMT 2012 Rank 34 Aligned Residues 291 % Identity 14% Template c2pqmA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cysteine synthase; PDBTitle: crystal structure of cysteine synthase (oass) from entamoeba2 histolytica at 1.86 a resolution Resolution 1.86 Å

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		84	.	.	.	.	.	90	.												.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Query Sequence		A	P	V	A	N	V	E	S	.	.	.	.	.	.	.	.	.	.	.	D	V	G	C	L	E	L	F	H	G	P	T	L	A	F	K	D	F	G	G	R	F	M	A	Q	M	L	T	H	I	A	G	D	K	P	.	.	.	.	V	T	I	L	T	A	T	S	G	D	T	G	A	A	V	A	H	A	F	Y	G	L
Query Conservation										.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.																								.	.	.										.	.	.	.																	.
Template Conservation																																												.	.	.																														.
Template Sequence		T	P	L	V	E	L	H	G	V	T	E	H	P	R	I	K	K	G	T	R	I	L	V	K	L	E	Y	F	N	P	M	S	S	V	K	D	R	V	G	F	N	I	.	.	.	V	Y	Q	A	I	K	D	G	R	L	K	P	G	M	E	I	I	E	S	T	S	G	N	T	G	I	A	L	C	.	Q	A	G	A	V
Template Known Secondary structure									G	G	G		S	T	T	S		T	T								G	G	G	S	T	T	S	B	T									.	.	.								T	S	S		T	T								S	S								.
Template Predicted Secondary structure																																												.	.	.																														.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		P	N	V	K	V	V	I	L	Y	P	R	G	K	I	S	P	L	Q	E	K	L	F	C	T	L	G	G	N	I	E	T	V	A	I	D	G	D	F	D	A	C	Q	A	L	V	K	Q	A	F	D	D	E	E	.	.	L	K	V	A	L	G	L	N	S	A	N	S	I	N	I	S	R	L	L	A	Q	I	C	Y	Y
Query Conservation																																																							.	.
Alig confidence														.																																									.	.									.	.	.	.	.
Template Conservation														.																																																			.	.	.	.	.
Template Sequence		F	G	Y	R	V	N	I	A	M	P	S	T	.	M	S	V	E	R	Q	M	I	M	K	A	F	G	A	E	L	I	L	T	E	G	K	K	G	M	P	G	A	I	E	E	V	N	K	M	I	K	E	N	P	G	K	Y	F	V	A	N	Q	F	G	.	.	.	.	.	N	P	D	N	T	A	A	H	H	Y	T	A
Template Known Secondary structure			T									T	T	.	S											T	T								G	G	G																S	T	T	T						T	T	T	.	.	.	.	.
Template Predicted Secondary structure														.																																																			.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	A	V	A	Q	L	P	Q	E	T	R	N	Q	L	V	V	S	V	P	S	G	N	F	G	D	L	T	A	G	L	L	A	K	S	L	G	L	P	V	K	R	F	I	A	A	T	N	V	N	D	T	V	P	R	F	L	H	D	G	Q	W	S	P	K	A	T	Q	A	T	L	S	N	A	M	D	V	S	Q	P
Query Conservation
Alig confidence									.	.	.																																													.	.	.	.																		.	.	.
Template Conservation									.	.	.																																													.	.	.	.																		.	.	.
Template Sequence		N	E	I	W	E	D	T	.	.	.	D	G	E	V	D	I	V	V	S	A	V	G	T	S	G	T	V	I	G	V	A	E	K	L	K	E	K	K	K	G	I	K	I	I	A	V	E	P	E	E	S	A	V	L	.	.	.	.	E	G	K	A	K	G	P	H	G	I	Q	G	I	G	A	G	F	.	.	.	I	P
Template Known Secondary structure								T	.	.	.	T	T										S	S	S															T	T									G	G	G		T	T	.	.	.	.	T	T									T	T				S	S	.	.	.
Template Predicted Secondary structure									.	.	.																																													.	.	.	.																		.	.	.
Template SS confidence
		174	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.					.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																									.																				.	.	.	.
Query SS confidence																																									.																				.	.	.	.
Query Sequence		N	N	W	P	R	V	E	E	L	F	R	R	K	I	W	Q	L	K	E	L	G	Y	A	A	V	D	D	E	T	T	Q	Q	T	M	R	E	L	K	E	.	L	G	Y	T	S	E	P	H	A	A	V	A	Y	R	A	L	R	D	Q	.	.	.	.	L	N	P	G	E	Y	G	L	F	L	G	T	A	H	P	A	K
Query Conservation																																									.																				.	.	.	.
Alig confidence						.	.	.	.	.	.							.	.	.	.	.																			.																				.	.	.	.
Template Conservation						.	.	.	.	.	.							.	.	.	.	.
Template Sequence		D	I	Y	K	.	.	.	.	.	.	K	E	F	V	D	E	.	.	.	.	.	I	I	P	I	K	T	Q	D	A	W	K	M	A	R	A	V	V	K	Y	D	G	I	M	C	G	M	S	S	G	A	A	I	L	A	G	L	K	E	A	E	K	P	E	N	E	G	K	T	I	V	I	I	V	P	S	C	G	E	R
Template Known Secondary structure		T	T			.	.	.	.	.	.	G	G	G				.	.	.	.	.																								B																T	S	G	G	G	T	T									B	B	G	G	G
Template Predicted Secondary structure						.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
		244	.	.	.							.	.	250	.	.	.						.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	E	S	V	E	A	I	L	G	E	T	L	D	L	P	K	E	L	A	E	R	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	S	T	D	L	Y	K	I	K	D	E	G	T	K	I	Q	I	L	D	S	L	L	N
Template Known Secondary structure		G	T	T	S	S	T	T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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