Job Description P00934 Confidence 23.30% Date Thu Jan 5 10:57:12 GMT 2012 Rank 135 Aligned Residues 134 % Identity 10% Template c2nu8D_ PDB info PDB header:ligase Chain: D: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: c123at mutant of e. coli succinyl-coa synthetase Resolution 2.15 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		K	P	V	T	I	L	T	A	T	S	G	D	T	G	A	A	V	A	H	A	F	Y	G	L	P	N	V	K	V	V	I	L	Y	P	R	G	K	I	S	P	L	Q	E	K	L	F	C	T	L	.	.	G	G	N	I	E	T	V	A	I	D	G	D	F	D	A	C	Q	A	L	V	K	Q	A	F	D	D	E	E	L
Query Conservation																																																			.	.
Alig confidence																						.																.													.	.									.	.	.	.	.								.	.	.	.	.	.
Template Conservation																						.																.																							.	.	.	.	.								.	.	.	.	.	.
Template Sequence		G	A	T	A	S	V	I	Y	V	P	A	P	F	C	K	D	S	I	L	E	.	A	I	D	A	G	I	K	L	I	I	T	I	T	E	G	.	I	P	T	L	D	M	L	T	V	K	V	K	L	D	E	A	G	V	R	M	I	G	.	.	.	.	.	P	N	T	P	G	V	I	.	.	.	.	.	.	T	P	G
Template Known Secondary structure												G	G	G								.				T	T											.																	T						.	.	.	.	.	S	S						.	.	.	.	.	.		T	T
Template Predicted Secondary structure																						.																.																							.	.	.	.	.								.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.							.	.	130
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250				.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																		.	.																																	.	.	.
Query SS confidence																		.	.																																	.	.	.
Query Sequence		K	V	A	L	G	L	N	S	A	N	S	I	N	I	S	R	.	.	L	L	A	Q	I	C	Y	Y	F	E	A	V	A	Q	L	P	Q	E	T	R	N	Q	L	V	V	S	V	P	S	G	N	F	.	.	.	G	D	L	T	A	G	L	L	A	K	S	L	G	L	P	V	K	R	F	I	A
Query Conservation																		.	.																																	.	.	.
Alig confidence																		.	.																																	.	.	.
Template Conservation
Template Sequence		E	C	K	I	G	I	Q	P	G	H	I	H	K	P	G	K	V	G	I	V	S	R	S	G	T	L	T	Y	E	A	V	K	Q	T	T	D	Y	G	F	G	Q	S	T	C	V	G	I	G	G	D	P	I	P	G	S	N	F	I	D	I	L	E	M	F	E	K	D	P	Q	T	E	A	I	V
Template Known Secondary structure		T					S	S		G	G	G											S															T	T											S	S	S	S		S	S											T		T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions