Return to main results Retrieve Phyre Job Id

Job DescriptionP00934
Confidence100.00%DateThu Jan 5 10:57:12 GMT 2012
Rank27Aligned Residues274
% Identity18%Templatec1jbqD_
PDB info PDB header:lyaseChain: D: PDB Molecule:cystathionine beta-synthase; PDBTitle: structure of human cystathionine beta-synthase: a unique pyridoxal 5'-2 phosphate dependent hemeprotein
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   84.....90 .........100.........110.........120...... ...130.........140.........150
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Query Sequence  APVANVE. . . . . . . . . SDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAGDKP. . . . VTILTATSGDTGAAVAHAFYGLPN
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Template Sequence  TPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRM. . . IEDAERDGTLKPGDTIIEPTSGNTGIGLA. LAAAVRG
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STT

SGGGSTTSBT...T
S
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SS.T
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   87..90.........100.........110.........120...... ...130.........140.........150..... ....160..
 
   151........160.........170.........180.........190.........200.........210.........220 .........
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Query Sequence  VKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLL. AQICYYFEA
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Template Sequence  YRCIIVMPEK. MSSEKVDVLRALGAEI. . VRTPTE. SHVGVAWRLKNEIPNSHILDQYR. . . . . NASNPLAHYDTTADEI
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S
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TT
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   163......170.. .......180........ .190.... .....200.........210....... ..220.........230...
 
   230.........240.........250.........260.........270.........280.........290.........300.........
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Query Sequence  VAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNAMDVSQPNNW
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Template Sequence  LQQC. . . DGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSI. . . LAEPEELNQTEQTTYEVEGIGYDFIPTV
Template Known Secondary structure  ...TT



SSS
TT
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S...
SSSGGGG

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   241... .....250.........260.........270.........280...... ...290.........300.........310....
 
   310.........320.........330.........340..... ....350.........360.... .....370.........380.....
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Query Sequence  PRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKE. LGYTSEPHAAVAYRALRDQ. . . LNPGEYGLFLGTAHPAKFKES
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Template Sequence  . . . . . LDRTVVDK. . . . . WFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQELQEGQRCVVILPDSVRNYMTK
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GGG

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GGG

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BBGGGGTTT
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   315....320.. .......330.........340.........350.........360.........370.........380....
 
   386
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Query Sequence  V
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Template Conservation   
Template Sequence  F
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   385
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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