Job Description P00934 Confidence 21.45% Date Thu Jan 5 10:57:12 GMT 2012 Rank 146 Aligned Residues 138 % Identity 11% Template c1j8yF_ PDB info PDB header:signaling protein Chain: F: PDB Molecule:signal recognition 54 kda protein; PDBTitle: signal recognition particle conserved gtpase domain from a.2 ambivalens t112a mutant Resolution 2.00 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.										70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.
Query Sequence		V	T	R	S	A	K	I	L	S	A	F	I	G	D	E	I	P	Q	.	.	.	.	.	.	.	.	.	E	I	L	E	E	R	V	R	A	A	F	A	F	P	A	P	V	A	N	V	E	S	D	V	G	C	L	E	L	F	H	G	P	T	L	A	F	K	D	F	G	G	R	F	M	A	Q	M	L	T	H	I	A
Query Conservation																				.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.
Template Sequence		F	S	L	T	N	K	I	K	E	R	L	K	N	E	K	P	P	T	Y	I	E	R	R	E	W	F	I	K	I	V	Y	D	E	L	S	N	L	F	G	G	D	K	E	P	K	V	I	P	D	K	I	P	Y	V	I	M	L	V	G	V	Q	G	.	.	.	.	.	.	.	T	T	A	G	K	L	A	Y	F	Y	K
Template Known Secondary structure																			T	T																			T	T		S						S		S	S	S	S								S			.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.
		123	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure						.	.																																														.	.	.															.	.
Query SS confidence						.	.																																														.	.	.															.	.
Query Sequence		G	D	K	P	.	.	V	T	I	L	T	A	T	S	G	D	T	G	A	A	V	A	H	A	F	Y	G	L	P	N	V	K	V	V	I	L	Y	P	R	G	K	I	S	P	L	Q	E	K	L	F	C	.	.	.	T	L	G	G	N	I	E	T	V	A	I	D	G	D	.	.	F	D	A	C	Q	A	L	V	K	Q
Query Conservation						.	.																																														.	.	.															.	.
Alig confidence						.	.																																														.	.	.															.	.
Template Conservation
Template Sequence		K	K	G	F	K	V	G	L	V	G	A	D	V	Y	R	P	A	A	L	E	Q	L	Q	Q	L	G	Q	Q	I	G	V	P	V	Y	G	E	P	G	E	K	D	V	V	G	I	A	K	R	G	V	E	K	F	L	S	E	K	M	E	I	I	I	V	D	T	A	G	R	H	G	Y	G	E	E	A	A	L	L	E	E
Template Known Secondary structure			T	T											S	S															T							T	T																		T	T		S									S			T	T
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		196
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		204

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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