 |
Job Description | P18133 | Confidence | 40.47% | Date | Thu Jan 5 11:36:41 GMT 2012 |
Rank | 60 | Aligned Residues | 103 |
% Identity | 17% | Template | d1yxya1 |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| NanE-like
|
Resolution | 1.60 |
|
 |
  |   |
231 | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | |
|
|
. | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | D | L | A | N | S | Q | R | A | A | L | A | A | W | L | E | E | Y | P | D | Q | L | G | I | A | L | T | D | C | I | T | M | D | A | F | L | R | D | F | G | V | E | F | . |
. |
. |
A | S | R | Y | Q | G | L | R | H | D | S | G | D | P | V | E | W | G | E | K | A | I | A | H | Y | E | K | L | G | I | D | P | Q | S |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |
|
|
|   |
|
|
|
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   | . |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
| . | . | . |
Template Sequence |   |
D | R | H | D | G | L | D | I | A | S | F | I | R | Q | V | K | E | K | Y | P | N | Q | . |
L | L | M | A | D | I | S | T | F | D | E | G | L | V | A | H | Q | A | G | I | D | F | V | G | T | T | L | S | G | Y | T | P | Y | S | R | Q | E | A | G | P | D | V | A | L | I | E | A | L | C | K | A | G | I | A | . |
. |
. |
Template Known Secondary structure |   |
|
| T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| T | T |
| . |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |
| T | T | T | T | S | S | T | T | S |
|
| S | S | S |
|
|  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | |
|
|
  |
  |   |
308 | . | 310 | . | . | . | . | . | . | |
. | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | T | L | V | F | S | D | N | L | . |
D | L | R | K | A | V | E | L | Y | R | H | F | S | S | R | V | Q | L | S | F | G | I | G | T | R | L | T |
Query Conservation |   |
  |   |
|
|   |
|   |   |
| . |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |
|
|
|   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |
|
| . | . | . | . |
|   |
|   |
|
|
|
|
|   |
Template Sequence |   |
. |
. |
V | I | A | E | G | K | I | H | S | P | E | E | A | K | K | I | N | D | L | G | V | . |
. |
. |
. |
A | G | I | V | V | G | G | A | I | T |
Template Known Secondary structure |   |
. | . |  |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . | . | S |  |  |  |  |
|  |  |  |  |
Template Predicted Secondary structure |   |
. | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
|
|
|
210 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|