 |
Job Description | P18133 | Confidence | 24.87% | Date | Thu Jan 5 11:36:41 GMT 2012 |
Rank | 82 | Aligned Residues | 104 |
% Identity | 8% | Template | d1xcfa_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Tryptophan biosynthesis enzymes
|
Resolution | 1.80 |
|
 |
  |   |
229 | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | S | P | D | L | A | N | S | Q | R | A | A | L | A | A | W | L | E | E | Y | P | D | Q | L | G | I | A | L | T | D | C | I | T | M | D | A | F | L | R | D | F | G | V | E | F | A | S | R | Y | Q | G | L | R | H | D | S | G | D | P | V | E | W | G | E | K | A | I | A | H | Y | E | K | L | G | I | D | P | Q | S | K |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   | . | . | . | . | . | . | . |   |   |
|
Template Sequence |   |
L | V | A | D | V | P | V | E | E | S | A | P | F | R | Q | A | A | L | R | H | N | V | A | P | I | F | I | C | P | P | N | A | D | D | D | L | L | R | Q | I | A | S | Y | G | R | G | F | T | Y | L | L | S | R | A | A | A | L | P | L | N | H | L | V | A | K | L | K | E | Y | N | . |
. |
. |
. |
. |
. |
. |
A | A | P |
Template Known Secondary structure |   |
 |  | T | T |
|
| G | G | G |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |
|
|  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . |
|
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
127 | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . |
  |
  |   |
309 | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | V | F | S | D | N | L | D | L | R | K | A | V | E | L | Y | R | H | F | S | S | R | V | Q | L | S | F | G | I | G | T | R | L | T |
Query Conservation |   |
  |
|
|   |
|   |   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |
|   |
|
|
| . | . | . | . |
|   |
|
|
|
|
|
|
|   |
Template Sequence |   |
P | L | Q | G | F | G | I | S | A | P | D | Q | V | K | A | A | I | D | A | G | A | . |
. |
. |
. |
A | G | A | I | S | G | S | A | I | V |
Template Known Secondary structure |   |
 |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  |  | T | T |
| . | . | . | . | S |  |  |  |  |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|  |  |  |  |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | |
|
|
|
. | 230 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|