Job Description P18133 Confidence 99.90% Date Thu Jan 5 11:36:41 GMT 2012 Rank 24 Aligned Residues 241 % Identity 17% Template c3pajA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase, carboxylating; PDBTitle: 2.00 angstrom resolution crystal structure of a quinolinate2 phosphoribosyltransferase from vibrio cholerae o1 biovar eltor str.3 n16961 Resolution 2.00 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.											.
Query SS confidence																																																																						.											.
Query Sequence		Y	D	V	H	V	A	A	E	F	R	C	R	G	D	D	L	L	G	I	Y	A	D	A	I	R	E	Q	V	Q	A	M	Q	H	L	R	L	Q	D	D	E	Y	Q	W	L	S	A	L	P	F	F	K	A	D	Y	L	N	W	L	R	E	F	R	F	N	P	E	Q	V	.	T	V	S	N	D	N	G	K	L	D	.
Query Conservation																																																																						.											.
Alig confidence															.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.											.
Template Conservation															.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	R	I	S	T	A	T	I	I	T	R	E	.	.	.	.	A	G	V	F	C	G	Q	L	W	A	D	E	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	L	G	G	Q	V	S	I	E	W	H	V	Q	D	G	D	T	L	T	P	N
Template Known Secondary structure		T	T										S	S	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S							S	S		T	T					T	T
Template Predicted Secondary structure															.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.																												.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
					109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	I	R	L	S	G	P	W	R	E	V	I	L	W	E	V	P	L	L	A	V	I	S	E	M	V	H	R	Y	R	S	P	Q	A	D	V	A	Q	A	L	D	T	L	E	S	K	L	V	D	F	S	A	L	T	A	G	L	D	M	S	R	F	H	L	M	D	F	G	T	R	R	R	F	S	R	E	V	Q
Query Conservation		.	.	.
Alig confidence		.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Sequence		Q	T	L	C	T	L	T	G	P	A	R	I	L	L	T	G	E	R	N	A	M	N	F	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	S	G	C	A	T	A	T	A	R	Y	V	Q	E	L	K	G	T	Q	C	R	L	L	D	T	R	K	T	I	P	.	.	G	L
Template Known Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	S	S							S				T	.	.	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	I	V	K	R	L	Q	Q	E	S	W	F	V	G	T	S	N	Y	D	L	A	R	R	L	S	L	T	P	M	G	T	Q	A	H	E	W	F	Q	A	H	Q	Q	I	S	P	D	L	A	N	S	Q	R	A	A	L	A	A	W	L	E	E	Y	P	D	Q	L	G	I	A	L	T	D	C	I	T	M	D	A	F
Query Conservation
Alig confidence																											.	.	.	.	.						.	.						.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation																											.	.	.	.	.						.	.						.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Sequence		R	S	A	L	K	Y	A	V	A	C	G	G	G	Y	N	H	R	I	G	V	F	D	A	Y	L	.	.	.	.	.	I	K	E	N	H	.	.	I	I	A	C	G	.	.	.	.	.	.	.	.	G	I	R	Q	A	I	S	T	A	K	Q	L	N	P	G	K	P	V	E	V	E	T	E	T	.	.	.	.	.	.
Template Known Secondary structure												T	T		B				S	S	S	S	S				.	.	.	.	.						.	.					T	.	.	.	.	.	.	.	.	S												S	T	T	S							S	S	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.						.	.						.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.			.	.	190	.	.									.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	D	F	G	V	E	F	A	S	R	Y	Q	G	L	R	H	D	S	G	D	P	V	E	W	G	E	K	A	I	A	H	Y	E	K	L	G	I	D	P	Q	S	K	T	L	V	F	S	D	N	L	D	L	R	K	A	V	E	L	Y	R	H	F	S	S	R	V	Q	L	S	F	G	I	G	T	R	L	T	C	D
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.																									.	.	.	.								.				.
Template Conservation																																			.	.	.	.	.	.	.																									.	.	.	.								.				.
Template Sequence		L	A	E	L	E	E	A	I	S	A	G	A	D	I	I	M	L	D	N	F	S	L	E	M	M	R	E	A	V	K	I	N	A	.	.	.	.	.	.	.	G	R	A	A	L	E	N	S	G	N	I	T	L	D	N	L	K	E	C	A	E	T	G	V	.	.	.	.	D	Y	I	S	V	G	A	.	L	T	K	.
Template Known Secondary structure											T	T		S						S														T	.	.	.	.	.	.	.	T	S	S						S	S											T	T	T		.	.	.	.	S					T		.				.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.																									.	.	.	.								.				.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.								250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280		.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	Q	V	K	P	L	N	I	V	I	K	L	V	E
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	H	L	K	A	L	D	L	S	M	R	F	K	S
Template Known Secondary structure		.	.	S
Template Predicted Secondary structure		.	.
Template SS confidence
				284	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions