Job Description P18133 Confidence 99.92% Date Thu Jan 5 11:36:41 GMT 2012 Rank 22 Aligned Residues 258 % Identity 14% Template c3l0gD_ PDB info PDB header:transferase Chain: D: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of nicotinate-nucleotide pyrophosphorylase from2 ehrlichia chaffeensis at 2.05a resolution Resolution 2.05 Å

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		8	.	10	.	.	.	.	.	.	.			.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure												.	.		.
Query SS confidence												.	.		.
Query Sequence		V	L	H	S	L	L	D	T	D	A	.	.	Y	.	K	L	H	M	Q	Q	A	V	F	H	H	Y	Y	D	V	H	V	A	A	E	F	R	C	R	G	D	D	L	L	G	I	Y	A	D	A	I	R	E	Q	V	Q	A	M	Q	H	L	R	L	Q	D	D	E	Y	Q	W	L	S	A	L	P	F	F	K	A	D	Y
Query Conservation												.	.		.
Alig confidence												.	.		.				.	.	.	.																				.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.																				.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	H	N	A	L	K	E	D	L	G	D	K	G	D	I	T	.	.	.	.	T	N	S	I	L	I	N	E	K	V	N	F	A	I	N	T	R	E	N	.	.	.	.	L	V	V	C	G	I	P	I	L	E	E	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	T	T					.	.	.	.						S	S										S	S		.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.																				.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.										.	.	.	.
Query SS confidence																	.										.	.	.	.
Query Sequence		L	N	W	L	R	E	F	R	F	N	P	E	Q	V	T	.	V	S	N	D	N	G	K	L	D	.	.	.	.	I	R	L	S	G	P	W	R	E	V	I	L	W	E	V	P	L	L	A	V	I	S	E	M	V	H	R	Y	R	S	P	Q	A	D	V	A	Q	A	L	D	T	L	E	S	K	L	V	D	F	S	A
Query Conservation																	.										.	.	.	.
Alig confidence		.	.	.	.												.										.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	N	M	N	K	E	H	V	K	Y	E	I	H	K	K	D	G	D	I	T	G	K	N	S	T	L	V	S	G	E	A	L	A	I	Y	L	L	P	I	E	R	V	I	L	N	F	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	S	G	I	A	S	I	T
Template Known Secondary structure		.	.	.	.		T	T	T	T	T									T	T					T	T														G	G	G										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																					.	.	.	.	.	.	110	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	G	L	D	M	S	R	F	H	L	M	D	F	G	T	R	R	R	F	S	R	E	V	Q	E	T	I	V	K	R	L	Q	Q	E	S	W	F	V	G	T	S	N	Y	D	L	A	R	R	L	S	L	T	P	M	G	T	Q	A	H	E	W	F	Q	A	H	Q	Q	I	S	P	D	L	A	N	S	Q	R	A
Query Conservation
Alig confidence																									.	.																			.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																									.	.																			.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		R	Q	F	V	D	E	V	S	G	T	K	V	K	I	R	S	T	R	K	T	T	P	G	.	.	L	R	M	L	D	K	Y	S	V	C	I	G	G	G	E	S	Y	R	.	.	.	.	.	.	.	D	N	L	C	D	G	V	L	I	K	D	N	H	I	A	S	C	G	.	.	.	.	.	.	.	.	S	I	T	L
Template Known Secondary structure								T	T	T	S	S							S				T	T	.	.												T	T		B		S		.	.	.	.	.	.	.	S	S	T	T	S													S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.																			.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.								.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.									.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	A	W	L	E	E	Y	P	D	Q	L	G	I	A	L	T	D	C	I	T	M	D	A	F	L	R	D	F	G	V	E	F	A	S	R	Y	Q	G	L	R	H	D	S	G	D	P	V	E	W	G	E	K	A	I	A	H	Y	E	K	L	G	I	D	P	Q	S	K	T	L	V	F	S	D	N	L	D	L	R
Query Conservation
Alig confidence																						.	.	.	.	.	.																										.									.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.																										.									.	.	.	.	.	.
Template Sequence		A	I	Q	R	L	R	K	N	L	K	N	E	Y	I	A	I	E	C	D	N	.	.	.	.	.	.	I	S	Q	V	E	E	S	L	S	N	N	V	D	M	I	L	L	D	N	M	S	I	S	E	I	.	K	K	A	V	D	I	V	N	.	.	.	.	.	.	G	K	S	V	L	E	V	S	G	C	V	N	I	R
Template Known Secondary structure										S	T	T								S	S	.	.	.	.	.	.										T	T		S						S							.								T	.	.	.	.	.	.	T	S	S						S				T	T
Template Predicted Secondary structure																						.	.	.	.	.	.																										.									.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.							.	230	.	.	.	.	.	.	.	.	.	240	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	V	E	L	Y	R	H	F	S	S	R	V	Q	L	S	F	G	I	G	T	R	L	T	C	D	I	P	Q	V	K	P	L	N	I	V	I	K	L
Query Conservation
Alig confidence												.	.	.	.							.					.	.	.
Template Conservation												.	.	.	.							.					.	.	.
Template Sequence		N	V	R	N	I	A	L	T	G	V	.	.	.	.	D	Y	I	S	I	G	.	C	I	T	N	.	.	.	S	F	Q	N	K	D	I	G	L	D	I
Template Known Secondary structure		T							T	T		.	.	.	.	S					G	.	G	G	S	S	.	.	.	S
Template Predicted Secondary structure												.	.	.	.							.					.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.					.	.	.	.	.	.		.	260	.	.				.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions