Job Description P18133 Confidence 99.88% Date Thu Jan 5 11:36:41 GMT 2012 Rank 25 Aligned Residues 266 % Identity 16% Template c2jbmA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; PDBTitle: qprtase structure from human Resolution 2.0 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	L	H	S	L	L	D	T	D	A	Y	K	L	H	M	Q	Q	A	V	F	H	H	Y	Y	D	V	H	V	A	A	E	F	R	C	R	G	D	D	L	L	G	I	Y	A	D	A	I	R	E	Q	V	Q	A	M	Q	H	L	R	L	Q	D	D	E	Y	Q	W	L	S	A	L	P	F	F	K	A	D	Y	L	N
Query Conservation
Alig confidence																								.	.	.													.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.													.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	V	D	S	W	L	R	E	D	C	P	G	L	N	Y	A	A	L	V	S	G	.	.	.	A	G	P	S	Q	A	A	L	W	A	K	S	.	.	.	.	P	G	V	L	A	G	Q	P	F	F	D	A	I	F	T	Q	L	N	C	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													S	S			T	T						.	.	.	S											S	.	.	.	.																	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.													.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		W	L	R	E	F	R	F	N	P	E	Q	V	T	V	S	N	D	N	G	K	L	D	.	.	.	.	I	R	L	S	G	P	W	R	E	V	I	L	W	E	V	P	L	L	A	V	I	S	E	M	V	H	R	Y	R	S	P	Q	A	D	V	A	Q	A	L	D	T	L	E	S	K	L	V	D	F	S	A	L	T	A
Query Conservation																								.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.														.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	V	S	W	F	L	P	E	G	S	K	L	V	P	V	A	R	V	A	E	V	R	G	P	A	H	C	L	L	L	G	E	R	V	A	L	N	T	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	C	S	G	I	A	S	A	A	A	A	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.				S	S		T	T					S	S																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																					.	.	.	.	.	.	.	.	120	.	.	.
		163	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		G	L	D	M	.	.	S	R	F	H	L	M	D	F	G	T	R	R	R	F	S	R	E	V	Q	E	T	I	V	K	R	L	Q	Q	E	S	W	F	V	G	T	S	N	Y	D	L	A	R	R	L	S	L	T	P	M	G	T	Q	A	H	E	W	F	Q	A	H	Q	Q	I	S	P	D	L	A	N	S	Q	R	A	A
Query Conservation						.	.
Alig confidence						.	.																	.	.																			.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																								.	.																			.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		V	E	A	A	R	G	A	G	W	T	G	H	V	A	G	T	R	K	T	T	P	G	.	.	F	R	L	V	E	K	Y	G	L	L	V	G	G	A	A	S	H	R	.	.	.	.	.	.	.	Y	D	L	G	G	L	V	M	V	K	D	N	H	V	V	A	A	G	.	.	.	.	.	.	.	.	G	V	E	K	A
Template Known Secondary structure								T	T			S						S				T	T	.	.												T	T		B				.	.	.	.	.	.	.		S	T	T	S	S												T	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																								.	.																			.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.								.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.									.	.	.	.	.
		241	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	A	A	W	L	E	E	Y	P	.	D	Q	L	G	I	A	L	T	D	C	I	T	M	D	A	F	L	R	D	F	G	V	E	F	A	S	R	Y	Q	G	L	R	H	D	S	G	D	P	V	E	W	G	E	K	A	I	A	H	Y	E	K	L	G	I	D	P	Q	S	K	T	L	V	F	S	D	N	L	D	L	R
Query Conservation											.
Alig confidence											.											.	.	.	.	.	.																										.												.	.	.
Template Conservation																						.	.	.	.	.	.																										.												.	.	.
Template Sequence		V	R	A	A	R	Q	A	A	D	F	A	L	K	V	E	V	E	C	S	S	.	.	.	.	.	.	L	Q	E	A	V	Q	A	A	E	A	G	A	D	L	V	L	L	D	N	F	K	P	E	E	L	.	H	P	T	A	T	V	L	K	A	Q	F	.	.	.	P	S	V	A	V	E	A	S	G	G	I	T	L	D
Template Known Secondary structure										T	T	T	S							S	S	.	.	.	.	.	.										T	T		S						S							.												.	.	.	T	T	S						S	S			T	T
Template Predicted Secondary structure																						.	.	.	.	.	.																										.												.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.							.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	V	E	L	Y	R	H	F	S	S	R	V	Q	L	S	F	G	I	G	T	R	L	T	C	D	I	P	Q	V	K	P	L	N	I	V	I	K	L	V	E	C	N
Query Conservation
Alig confidence												.	.	.	.							.					.	.	.
Template Conservation												.	.	.	.							.					.	.	.
Template Sequence		N	L	P	Q	F	C	G	P	H	I	.	.	.	.	D	V	I	S	M	G	.	M	L	T	Q	.	.	.	A	A	P	A	L	D	F	S	L	K	L	F	A	K	E
Template Known Secondary structure		T							T	T		.	.	.	.						T	.					.	.	.	S
Template Predicted Secondary structure												.	.	.	.							.					.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.					.	.	.	270	.	.		.	.	.	.				.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions