Job Description P18133 Confidence 100.00% Date Thu Jan 5 11:36:41 GMT 2012 Rank 2 Aligned Residues 377 % Identity 38% Template c2im5C_ PDB info PDB header:transferase Chain: C: PDB Molecule:nicotinate phosphoribosyltransferase; PDBTitle: crystal structure of nicotinate phosphoribosyltransferase2 from porphyromonas gingivalis Resolution 2.20 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																								.																															.
Query SS confidence																																								.																															.
Query Sequence		V	L	H	S	L	L	D	T	D	A	Y	K	L	H	M	Q	Q	A	V	F	H	H	Y	Y	D	V	H	V	A	A	E	F	R	C	R	G	D	D	.	L	L	G	I	Y	A	D	A	I	R	E	Q	V	Q	A	M	Q	H	L	R	L	Q	D	D	E	Y	Q	W	L	S	.	A	L	P	F	F	K	A	D	Y	L
Query Conservation																																								.																															.
Alig confidence																																								.																															.
Template Conservation
Template Sequence		I	I	R	S	I	L	D	T	D	L	Y	K	F	T	T	G	Y	A	Y	A	K	L	F	P	R	A	Y	G	E	F	R	F	I	D	R	N	R	Q	G	F	T	E	E	F	A	E	L	V	R	G	E	I	R	A	M	A	A	L	S	L	T	R	D	E	K	E	F	L	Q	R	E	L	P	Y	L	P	P	I	Y	I
Template Known Secondary structure						T	T		S	B															T	T										T	T																			G	G	G																T	T	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		N	W	L	R	E	F	R	F	N	P	E	Q	V	T	V	S	N	D	.	N	G	K	L	D	I	R	L	S	G	P	W	R	E	V	I	L	W	E	V	P	L	L	A	V	I	S	E	M	V	H	R	Y	R	S	P	Q	A	D	V	A	Q	A	L	D	T	L	E	S	K	L	V	D	F	S	A	L	T	A	G	L
Query Conservation																				.
Alig confidence																				.																																																					.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.
Template Sequence		D	F	L	D	G	F	R	F	D	P	E	E	V	T	V	S	I	D	A	Q	G	H	L	D	I	R	A	Q	G	L	L	Y	R	V	T	L	W	E	T	P	I	L	A	V	I	S	E	L	Y	Y	R	F	I	G	A	E	P	D	W	K	Q	V	E	E	V	T	R	S	K	G	E	.	.	.	.	.	.	.	L	M
Template Known Secondary structure											G	G	G							T	T	S														G	G	G																T	T																		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.								.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		D	M	S	R	F	H	L	M	D	F	G	T	R	R	R	F	S	R	E	V	Q	E	.	.	T	I	V	K	R	L	Q	Q	E	S	W	F	V	G	T	S	N	Y	D	L	A	R	R	L	S	L	T	P	M	G	T	Q	A	H	E	W	F	Q	A	H	Q	Q	I	S	P	D	L	A	N	S	Q	R	A	A	L	A
Query Conservation																								.	.
Alig confidence																								.	.																																												.
Template Conservation																																																																					.
Template Sequence		R	E	H	R	A	T	F	S	I	F	G	M	R	R	R	F	S	L	E	V	E	D	R	V	T	D	I	L	K	Q	Y	A	G	E	S	L	F	G	T	S	N	V	H	L	A	H	K	H	G	L	R	V	S	G	T	H	P	H	E	W	I	Q	F	H	G	A	I	.	Y	G	Y	K	M	A	N	Y	V	A	M	E
Template Known Secondary structure				T	T								G	G	G		S																S	G	G	G					S	B								T																			.			T	T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	L	E	E	Y	P	D	Q	L	G	I	A	L	T	D	C	I	T	M	D	A	F	L	R	D	F	G	V	E	F	A	S	R	Y	Q	G	L	R	H	D	S	G	D	P	V	E	W	G	E	K	A	I	A	H	Y	E	K	L	G	I	D	P	Q	S	K	T	L	V	F	S	D	N	L	D	L	R	K	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	W	I	N	V	Y	D	G	D	L	G	T	V	L	T	D	T	Y	T	T	D	V	F	M	R	N	F	S	K	K	H	A	M	L	F	T	S	L	R	H	D	S	G	D	P	E	I	F	I	E	K	A	V	R	R	Y	E	E	L	R	V	D	P	K	I	K	Y	I	I	F	S	D	S	L	T	P	Q	R	A	I
Template Known Secondary structure								T	T	S	S							T	T																								S	S																T	T			G	G	G							S	S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.							.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																										.																	.	.	.	.	.	.
Query SS confidence																										.																	.	.	.	.	.	.
Query Sequence		E	L	Y	R	H	F	S	S	R	V	Q	L	S	F	G	I	G	T	R	L	T	C	D	I	.	P	Q	V	K	P	L	N	I	V	I	K	L	V	E	C	N	.	.	.	.	.	.	G	K	P	V	A	K	L	S	D	S	P	G	K	T	I	C	H	D	K	A	F	V	R	A	L	R	K	A	F	D	L
Query Conservation																										.																	.	.	.	.	.	.
Alig confidence																										.																	.	.	.	.	.	.																.
Template Conservation																																																																.
Template Sequence		E	I	Q	K	L	C	A	G	R	I	K	A	S	F	G	I	G	T	N	L	T	N	D	V	G	G	G	V	E	P	L	N	I	V	M	K	L	W	K	C	K	M	T	A	K	D	D	W	H	Y	C	V	K	L	S	D	V	D	G	K	H	T	.	G	E	P	E	E	I	L	L	A	M	N	T	L	G	I
Template Known Secondary structure								T	T	T	S												S			S	T	T															S	S	T	T	S							B			S	S	T	T			B	.	S												T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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